Transcript Information: S_Transcript_10808.p1


Annotated TAIR IDAT1G19150.1
Annotated Gene Namephotosystem I light harvesting complex gene 6
Annotated Gene Symbol(s)LHCA6, LHCA2*1
Annotation TypeOrtholog
Chromosome Positionchr1:6612806-6613799 | Forward length=270
E-Value1.2E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1155.47595458448
Replicate 2159.31656459427
Replicate 3190.96320765862
Condition 2: 8 Hour
Replicate 1203.15240249479
Replicate 2216.10420808831
Replicate 3209.11968387203
Condition 3: 24 Hour
Replicate 1130.76270608756
Replicate 2168.26886068614
Replicate 3159.56261776289


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10808.p1 GENE.S_Transcript_10808~~S_Transcript_10808.p1 ORF type:5prime_partial len:285 (+),score=51.78,Chloroa_b-bind|PF00504.17|2e-49 S_Transcript_10808:1-855(+)
GTTGCTAACTATAAGCTCCCCACAAAAAGGTATAGGAAGTACTATGTCAGTTCAGGGGATAAACATTTTGCCCCTCACGATATGGCTCTTGCTGTAGCTTCCACTGCACTTTCAAGCCTTCCATCTAGAGAAATTCCAGGGAAACTTTTTCAAGGAAGACTGAAAAAATGCAGCATTACAAGAGTGAAGGCTGGTAAAGAGGTGTCAAGTGTTTGTGAACCACTTCCTCCTGATAGGCCCCTGTGGTTCCCTGGTAGCACACCCCCTGAATGGCTAGACGGCAGTCTTCCAGGCGATTTTGGCTTCGACCCACTTGGATTAGGGTCTGACCCGGAGCTGCTAAGATGGTTTGCACAAGCAGAACTGATGCACAGCAGGTGGGCAATGCTGGCAGTAGCAGGGATCCTAATCCCTGAATGGCTTGAAAGCCTTGGCTTAATTGAAAACTTTGATTGGTACGATGCTGGGTCCCGCGAGTACTTTGCGGACCCCACCACCCTATTCGTGGTCCAAATGGCCTTAATGGGCTGGGTTGAGGGGCGAAGATGGGCTGACTACCTCAACCCAGGGAGTGTGGACATTGAGCCCAAGCTTCCCAACAGGAAGAACCCAAAGCCTGATGTGGGCTACCCTGGTGGGCTGTGGTTCGACCCAATGATGTGGGGCCGAGGATCGCCAGAGCCTGTGATGGTTATGAGGACTAAAGAGATTAAGAATGGGAGGCTTGCTATGTTAGCCTTTGCTGGGTTCTGTTTTCAGGCTGTTTATACAGGAGAAGGTCCTATTGAGAACCTCACCAAGCACATTGCTGATCCTGGTCACTACAACATATTTACGGCGTTTTCCTCGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10808.p1 GENE.S_Transcript_10808~~S_Transcript_10808.p1 ORF type:5prime_partial len:285 (+),score=51.78,Chloroa_b-bind|PF00504.17|2e-49 S_Transcript_10808:1-855(+)
VANYKLPTKRYRKYYVSSGDKHFAPHDMALAVASTALSSLPSREIPGKLFQGRLKKCSITRVKAGKEVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAGILIPEWLESLGLIENFDWYDAGSREYFADPTTLFVVQMALMGWVEGRRWADYLNPGSVDIEPKLPNRKNPKPDVGYPGGLWFDPMMWGRGSPEPVMVMRTKEIKNGRLAMLAFAGFCFQAVYTGEGPIENLTKHIADPGHYNIFTAFSSH*

Click here to download the sequence:
Link to NCBI Protein BLAST