Transcript Information: S_Transcript_108213.p1


Annotated TAIR IDAT4G39820.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18476698-18477924 | Reverse length=408
E-Value1.2E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91506021439016
Replicate 21.9597320237334
Replicate 31.2682683839725
Condition 2: 8 Hour
Replicate 12.0775451884886
Replicate 21.2820543633081
Replicate 32.5041540166311
Condition 3: 24 Hour
Replicate 11.4396341555406
Replicate 21.6884214927938
Replicate 31.2285809595615


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108213.p1 GENE.S_Transcript_108213~~S_Transcript_108213.p1 ORF type:complete len:349 (+),score=27.44,TPR_11|PF13414.2|58,TPR_11|PF13414.2|19,TPR_11|PF13414.2|5,TPR_11|PF13414.2|6.1e-06,TPR_2|PF07719.13|45,TPR_2|PF07719.13|0.26,TPR_2|PF07719.13|0.52,TPR_2|PF07719.13|22,TPR_1|PF00515.24|17,TPR_1|PF00515.24|2.3,TPR_1|PF00515.24|0.67,TPR_1|PF00515.24|22,TPR_12|PF13424.2|43,TPR_12|PF13424.2|12,TPR_12|PF13424.2|0.18 S_Transcript_108213:95-1048(+)
ATGGACTCACCATCACCGTCACCGGAATCTTCCACCACCACCGCAACCACCGAATCGACAAACGCAACCAACGAGGGACCAGAGGTTCTCATAAGCCAAGAAGCATCATCCCTACAAGAGCTAGCCATAAGAGGATCATGGCGAACAATCCTAGACAAAGTGAGCCGAGCCCGGTCACTCTCTCTGATCCGCTACCCACACGACCACCTCATTTTCCTGACCTTCAACGCCATTGCTCTCACCAAACTCCGCCGCTACTTAGAAGCCCTCGAAGACATTCAATCCTCCCTCGATAACAACCTCGACAGCCCCTCCTTTCGCTACGAAGCTTACCCTCACATTTACCCTAATCGCAAAGGCTCCATGATCCCTTTCTCTCTCCGCTGGCTCCACGCTCTCCTCCCCTCCTTTCTCAAGTCCTCTGACTCCCTTGATCGCCTCTACCTCCTCCTCGCTCACGTCAGATCCCACCTTGCTGACTCATCATCATCGTCATCTCGCGTCTGGCGGAGGAGACAGAATTTAGTCCTCGGCACTCTCGTTAGCCTCCACTCGAGCCAAAAGGAGTTCGGCGTGTGTTTGTCTCTCATCAAAGAAATGCTCGACGGTGACTTCAACAATCCGTCATTGCTGTCCAAGCTAGGGTACATCCAGCTCCAGTACGGCGACCTGGAAGGGGCGAAATCGTCATTTGACCAAGCCGAGAAACTCATCAAGGACAAATCCTCGATCGAGAATATTAACCTAGTAGCTCGTAACAAGGCTTTGATTTATTTGGTGGCTAAGGATTATGTTTCCGCGGTTAGGGAGTATGATGAGTGTATTGAAAGAGATGGTTCGGATGGGGTGGCTATTAATAATAAGGCGTTGTGTTTGATGTACTTGAGGGATTTGTCTGATTCCATTAAGGTTTTTGGAGAAATCGCTGGAGAGAGTGCCTACTGTGGCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108213.p1 GENE.S_Transcript_108213~~S_Transcript_108213.p1 ORF type:complete len:349 (+),score=27.44,TPR_11|PF13414.2|58,TPR_11|PF13414.2|19,TPR_11|PF13414.2|5,TPR_11|PF13414.2|6.1e-06,TPR_2|PF07719.13|45,TPR_2|PF07719.13|0.26,TPR_2|PF07719.13|0.52,TPR_2|PF07719.13|22,TPR_1|PF00515.24|17,TPR_1|PF00515.24|2.3,TPR_1|PF00515.24|0.67,TPR_1|PF00515.24|22,TPR_12|PF13424.2|43,TPR_12|PF13424.2|12,TPR_12|PF13424.2|0.18 S_Transcript_108213:95-1048(+)
MDSPSPSPESSTTTATTESTNATNEGPEVLISQEASSLQELAIRGSWRTILDKVSRARSLSLIRYPHDHLIFLTFNAIALTKLRRYLEALEDIQSSLDNNLDSPSFRYEAYPHIYPNRKGSMIPFSLRWLHALLPSFLKSSDSLDRLYLLLAHVRSHLADSSSSSSRVWRRRQNLVLGTLVSLHSSQKEFGVCLSLIKEMLDGDFNNPSLLSKLGYIQLQYGDLEGAKSSFDQAEKLIKDKSSIENINLVARNKALIYLVAKDYVSAVREYDECIERDGSDGVAINNKALCLMYLRDLSDSIKVFGEIAGESAYCGS*

Click here to download the sequence:
Link to NCBI Protein BLAST