Transcript Information: S_Transcript_108283.p1


Annotated TAIR IDAT1G52310.1
Annotated Gene Nameprotein kinase family protein / C-type lectin domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19478401-19480462 | Forward length=552
E-Value5E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6126246020607
Replicate 22.3959590469699
Replicate 35.7581393202192
Condition 2: 8 Hour
Replicate 11.1579397457267
Replicate 21.4172211807972
Replicate 34.7261381567606
Condition 3: 24 Hour
Replicate 10
Replicate 21.6408189376541
Replicate 32.3966648529748


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108283.p1 GENE.S_Transcript_108283~~S_Transcript_108283.p1 ORF type:3prime_partial len:221 (+),score=26.00,Lectin_C|PF00059.17|1.5e+04,Lectin_C|PF00059.17|1.6e-13 S_Transcript_108283:180-839(+)
ATGGGAGAAAATCAGATTTCATTTGGGTTAGTGGTGTTGTTGGTTGCCTGTGTTCTGTTTCAAGTATGTGCCTCTTCTGAAGAATCTAAACCAGGTTTGAGTCTTCCTCGCCGACATTTGGTTGCTTCAGCACACTGTAAATCTAATTGGGTTGCCAATGAAAACAAGACAAAATGCTTCCTGTATACACCAAAGATCAAATCATGGGATGAGTCAGAGGCTTCCTGTAAAGAGCATGAAGGACACTTGGCCTCTCTGTCATCAATCCAAGAGTTGAAATTTGTTCAAAAGCTGTGTAGCAAAAATTCTAGTGGGTGCTGGATTGGAGGGCGGGTAAACCTAACATCTGGTCGGGGTTGGACGTGGTCTGACCATAAATCTCATCACAACGATTCTCTTTTTCCTAAGCTGCAATCTGGATTAAAATGCGGCAACATGACATGCTACAACAACAAAACAAATGACTTGTGTACATTGCTGTCCTATGAAGTTTCATCCATCAAAGCTGAAGGAGGCAACAAGTATCATGGTTTTATTTGCATGGTTAACATTGAGAACAAGTGCTATGGACAGCAGTGTCACAGTATATATAAAATTATCTTGGCCGTAATTAGTGGAACAATTCTGTGTACCACGCAGCTGTTGTGGTTCGGTTACTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108283.p1 GENE.S_Transcript_108283~~S_Transcript_108283.p1 ORF type:3prime_partial len:221 (+),score=26.00,Lectin_C|PF00059.17|1.5e+04,Lectin_C|PF00059.17|1.6e-13 S_Transcript_108283:180-839(+)
MGENQISFGLVVLLVACVLFQVCASSEESKPGLSLPRRHLVASAHCKSNWVANENKTKCFLYTPKIKSWDESEASCKEHEGHLASLSSIQELKFVQKLCSKNSSGCWIGGRVNLTSGRGWTWSDHKSHHNDSLFPKLQSGLKCGNMTCYNNKTNDLCTLLSYEVSSIKAEGGNKYHGFICMVNIENKCYGQQCHSIYKIILAVISGTILCTTQLLWFGYL

Click here to download the sequence:
Link to NCBI Protein BLAST