Transcript Information: S_Transcript_108292.p1


Annotated TAIR IDAT1G52310.1
Annotated Gene Nameprotein kinase family protein / C-type lectin domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19478401-19480462 | Forward length=552
E-Value6E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.048788226017
Replicate 22.0649901556295
Replicate 32.4529747500355
Condition 2: 8 Hour
Replicate 12.3111260442213
Replicate 22.0939168677577
Replicate 33.2551294372139
Condition 3: 24 Hour
Replicate 13.9815797495172
Replicate 22.9027541920445
Replicate 35.2183540148516


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108292.p1 GENE.S_Transcript_108292~~S_Transcript_108292.p1 ORF type:complete len:203 (+),score=29.13,Lectin_C|PF00059.17|1.2e+04,Lectin_C|PF00059.17|1.5e-13 S_Transcript_108292:173-781(+)
ATGGGAGAAAATCAGATTTCATTTGGGTTAGTGGTGTTGTTGGTTGCCTGTGTTCTGTTTCAAGTATGTGCCTCTTCTGAAGAATCTAAACCAGGTTTGAGTCTTCCTCGCCGACATTTGGTTGCTTCAGCACACTGTAAATCTAATTGGGTTGCCAATGAAAACAAGACAAAATGCTTCCTGTATATACAGAAGTTCAAATCATGGGATGAGTCAGAGGCTTCCTGTAAAGAGCATGAAGGACACTTGGCCTCTCTGTCATCAATCCAAGAGTTGAAATTTGTTCAAAAGCTGTGTAGCAAAAATTCTAGTGGGTGCTGGATTGGAGGGCGGGTAAACCTAACATCTGGTCGGGGTTGGACGTGGTCTGACCATAAATCTCATCACAACGATTCTCTTTTTCCTAAGCTGCAATCTGGATTAAAATGCGGCAACATGACATGCTACAACAACAAAACAAATGACTTGTGTACATTGCTGTCCTATGAAGTTTCATCCATCAAAGCTGAAGGAGGCAACAAGTATCATGGTTTTATTTGCATGGTTAACATTGGTATGTTTTCTTGTGTAATGTTATCATTCATTCCCTTCATTTCCTTGAGATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108292.p1 GENE.S_Transcript_108292~~S_Transcript_108292.p1 ORF type:complete len:203 (+),score=29.13,Lectin_C|PF00059.17|1.2e+04,Lectin_C|PF00059.17|1.5e-13 S_Transcript_108292:173-781(+)
MGENQISFGLVVLLVACVLFQVCASSEESKPGLSLPRRHLVASAHCKSNWVANENKTKCFLYIQKFKSWDESEASCKEHEGHLASLSSIQELKFVQKLCSKNSSGCWIGGRVNLTSGRGWTWSDHKSHHNDSLFPKLQSGLKCGNMTCYNNKTNDLCTLLSYEVSSIKAEGGNKYHGFICMVNIGMFSCVMLSFIPFISLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST