Transcript Information: S_Transcript_108380.p1


Annotated TAIR IDAT4G32940.1
Annotated Gene Namegamma vacuolar processing enzyme
Annotated Gene Symbol(s)GAMMA-VPE, GAMMAVPE
Annotation TypeOrtholog
Chromosome Positionchr4:15900557-15903161 | Reverse length=494
E-Value1.2E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7462677362105
Replicate 22.8105464404477
Replicate 31.2138531180289
Condition 2: 8 Hour
Replicate 10.40749153472229
Replicate 21.2824626608761
Replicate 32.8964209059847
Condition 3: 24 Hour
Replicate 11.8088120087753
Replicate 21.8766213407167
Replicate 32.3561994773357


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108380.p1 GENE.S_Transcript_108380~~S_Transcript_108380.p1 ORF type:complete len:471 (+),score=81.66,Peptidase_C13|PF01650.14|1.4e-108,Peptidase_C14|PF00656.18|2e+02,Peptidase_C14|PF00656.18|5.3e-05 S_Transcript_108380:50-1414(+)
ATGGCTTTCTCCATTATTCCCACCGTTATACTTATCTTGCTCTCGACATTGTTCATCACTCAAAATGTTGAGAGCCGTTTAACCAAAGAAAATTTGGCCACAGCTTTGGGAACTTCTTCATCAACTTCCAAAGGTTATGATGAAGGTACAAAGTGGGCTGTTCTTGTGGCTGGTTCTATGGGTTATGGCAATTATAGACACCAGGCTGATATTTGCCATGCTTATCAAATCCTTAAGAAAGGTGGTCTCAAGGATGAAAACATCATAGTTTTCATGTATGATGATATTGCCAATAATGAAGAAAATCCCAGAAAAGGGACCATAATCAACAACCCACGAGGTGGAGATGTTTATAAGGGTGTTCCCAAGGATTACACAGGAAATAGTTTGACAACCAGCAATCTCTTAGCCGCTATACTTGGAAATAAGACAGCAATTAAAGGAGGCAGTGGCAAAGTTGTTAGCAGTGGCCCTAATGATCGTATTTTCATCTACTACTCCGACCATGGCAGTCCTGGTGTACTTACTATGCCTAACGACGACGACGATTTATATGCTAAAGACTTCATCAACACCTTGAAATTAAAGCATAAATCAGGCACCTATAAGAGCATGGTAATATATATTGAAGCTTGTGAAGCTGGGAGTATTTTTGAGGGTCTTTTGCCAAAGGAGTGGAATATATATGTAACAACTGCATCAAATCCCTCTGAAAGTAGTTGGGCTACTTATTGCCCCGGGTTCGACCCTCCTCCTCCATCAGAATATGATACTTGCTTGGGTGACTTATATAGCGTTGCTTGGATGGAAGACAGTGACATAAATAATCTTCAGTCAGAGACTCTAGAACAGCAATACAATGTGGTGAAGAAACGAACGGCTGACGGAAAAGAGCATGGATCTCATGTCATAGAATATGGAAACATGAATGTTAGCAAGAACCCTCTCTCTCTTTATTTGGGCTCAAATCCTAATTATGACCACAAGCATCATCATGATCATAAAGTTGAGGCAACAACCTTATCAACTGTTGAGCAACATGAAGCCGATATTATCTACTTAAAAGAAAAGGTTCGTAGAGCTCCTGAAGGGTCAAGCAAGAGGGCACAAGCTCAAAAAGAATTGGATGAAGCACTATCACATAGGAAGCATGTAGACTCTACCATTGATGCTATTGGAAATGCTCTTTTTGATGCTTCAAATGGTCAAGAAATTCTTAAGACCGTTCGATCTGCAGGGCAACCTATCGTGGACGATTGGGATTGCTTTAAGACAATGGTACAAGCGTTTAGTTACTTTATGGGTGTATCATTTTTCTTTTTCGTTAAAGAGAGGCTTTGTTCTTTAAATTTAAATTATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108380.p1 GENE.S_Transcript_108380~~S_Transcript_108380.p1 ORF type:complete len:471 (+),score=81.66,Peptidase_C13|PF01650.14|1.4e-108,Peptidase_C14|PF00656.18|2e+02,Peptidase_C14|PF00656.18|5.3e-05 S_Transcript_108380:50-1414(+)
MAFSIIPTVILILLSTLFITQNVESRLTKENLATALGTSSSTSKGYDEGTKWAVLVAGSMGYGNYRHQADICHAYQILKKGGLKDENIIVFMYDDIANNEENPRKGTIINNPRGGDVYKGVPKDYTGNSLTTSNLLAAILGNKTAIKGGSGKVVSSGPNDRIFIYYSDHGSPGVLTMPNDDDDLYAKDFINTLKLKHKSGTYKSMVIYIEACEAGSIFEGLLPKEWNIYVTTASNPSESSWATYCPGFDPPPPSEYDTCLGDLYSVAWMEDSDINNLQSETLEQQYNVVKKRTADGKEHGSHVIEYGNMNVSKNPLSLYLGSNPNYDHKHHHDHKVEATTLSTVEQHEADIIYLKEKVRRAPEGSSKRAQAQKELDEALSHRKHVDSTIDAIGNALFDASNGQEILKTVRSAGQPIVDDWDCFKTMVQAFSYFMGVSFFFFVKERLCSLNLNYN*

Click here to download the sequence:
Link to NCBI Protein BLAST