Transcript Information: S_Transcript_108385.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value4.4E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.37077508281
Replicate 29.2057766287518
Replicate 38.8317327724284
Condition 2: 8 Hour
Replicate 113.290824246946
Replicate 213.391599537865
Replicate 312.53431883814
Condition 3: 24 Hour
Replicate 18.4610464224132
Replicate 29.0575444151952
Replicate 38.6589765123198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108385.p1 GENE.S_Transcript_108385~~S_Transcript_108385.p1 ORF type:5prime_partial len:568 (+),score=98.94 S_Transcript_108385:1-1704(+)
AAATTCACTTTCACCATCAAAGTTTTAGCCTTTGATCGCTTACCTTCCCTATCTCGTTGCCTAAACTCTCTTTCTTCTGCCCATTATGGAACTGACACTGTCAATCTCCACATCTTCGTTGACCACTTTGTTAACCCATCTGGTGGGTCTCCTGATTTGGGCTCAAAGCTTGAGAATTCCCACAAAATATTGGATTTTGTTGATGGGTTTAAGTGGATTTTTGGAGAAAAGTTGGTTCATTATAGGACACTCAATGTGGGCTTGCAGGCCCAGTGGTTGGAAGCTTGGTGGCCTAGCAATGATGATGAGTTTGTGTTTGTTGTTGAAGATGATTTGGAGGTTTCTCCTCTTTATTATCAGTTCCTTAAGAGATTGATTGTTAATTATTATTACAATCAGTCTAATTTCAGCCCCTGGGTTTATGGTGCTTCCTTGCAACGACCAAGGTTTGTCCCAGGTAGACATGGAAACAAGATGCAGTTGGATAGTGAAACTAGAATCTTTCTCTATCAGTTGGTTGGAACTTGGGGTCAGCTTCTCTTTCCAAGACCCTGGAAGGAATTTCGCTTGTGGTATGACGATCATAAAGCCAGGGAGATGAAGCCGTTTCTTGAGGGAATGGTTACAACAGGATGGTACAAAAGGATGGGGGAGAGGATATGGACTCCATGGTTTATTAAATTTATTCATTCTCGTCGCTATTTCAATTTCTATTCAAATTTTCTCCACGAAAGGGCTCTTAGCGTTTCCCACAGAGATGCAGGTGTTAACTATGGGAAAACAGCAGGTCCAGATTCAGAACTATTGACCGAAAATTCTATTGATATCAACCGTCTGGACATGCAACCACTGAGTAGTCTGCAGTGGTATGATTTCTGCTTCAAAAAAGTCCTTCCTGGGAGAGTTGCAAAGAAGCTTGATGATGTTGGCCCTATCCTTCAGTCGATGAGTGAACAAAAGCCTGTCCTGTTGGTCAGCCTACTGACGGCTTCAGATATGATCATAAGAAATATGATGTGCCATTTTGAGAAGCTTAATATTCAAAACTACATTTTTATGTTGCCTAGGTCTAATTCAGACATGCTGCTTGATCTAGGAAGGCGAGGACATCCTGTGATTGATACAGAGGATGTCTTTGACAGCATCAAGAGAAGCCAAAGATCAAGTCCAGTAAAAATCAAAGAAATGGTGGTAAAAGCATATGTAGTTGAAAAATGTTTGGAATCTGGGTTTGACAGTTGGGTGTTTGATTGGAACACACTTCTACTTGGTGATTATCAACTACTCGACTCAACAGATTCTACGCATGACTTCTATGCTGGCAAGGGTTCTGGTTTTTTCATCGCCAGAAGCTCCTCCTCTTCTCGCAAGATTTGGCGTGGAAGTTTTGTGTCAAACTTTGCCACCATGTTAGAGTCTCTGGGTCGCCAAGATTCATCTGTCGTAGAGCACGGGAACTTCGGTGATGTAGTTGTGAAGTTTTCAGACAGACTTGGCGTTGGGTTGAAGATTATTGATGAGTCAAGCTTTAGCTTGAAACTTGAGAGCGTCAGTGGCAATCAATCAATACCAGCAATTACGAAAATGATTTTTTGGTCACTTCAGACAGATATGGATTCAGTACAGAAGCATCTCCAAGAAACGGGGATGTGGATAATTGATGGTGATTCCTCTTGCAAAGCTGTGATTTGTCACCAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108385.p1 GENE.S_Transcript_108385~~S_Transcript_108385.p1 ORF type:5prime_partial len:568 (+),score=98.94 S_Transcript_108385:1-1704(+)
KFTFTIKVLAFDRLPSLSRCLNSLSSAHYGTDTVNLHIFVDHFVNPSGGSPDLGSKLENSHKILDFVDGFKWIFGEKLVHYRTLNVGLQAQWLEAWWPSNDDEFVFVVEDDLEVSPLYYQFLKRLIVNYYYNQSNFSPWVYGASLQRPRFVPGRHGNKMQLDSETRIFLYQLVGTWGQLLFPRPWKEFRLWYDDHKAREMKPFLEGMVTTGWYKRMGERIWTPWFIKFIHSRRYFNFYSNFLHERALSVSHRDAGVNYGKTAGPDSELLTENSIDINRLDMQPLSSLQWYDFCFKKVLPGRVAKKLDDVGPILQSMSEQKPVLLVSLLTASDMIIRNMMCHFEKLNIQNYIFMLPRSNSDMLLDLGRRGHPVIDTEDVFDSIKRSQRSSPVKIKEMVVKAYVVEKCLESGFDSWVFDWNTLLLGDYQLLDSTDSTHDFYAGKGSGFFIARSSSSSRKIWRGSFVSNFATMLESLGRQDSSVVEHGNFGDVVVKFSDRLGVGLKIIDESSFSLKLESVSGNQSIPAITKMIFWSLQTDMDSVQKHLQETGMWIIDGDSSCKAVICHQS*

Click here to download the sequence:
Link to NCBI Protein BLAST