Transcript Information: S_Transcript_10849.p1


Annotated TAIR IDAT5G53080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21520624-21523158 | Forward length=564
E-Value3.5E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.485336042879
Replicate 232.19561318445
Replicate 331.355847656867
Condition 2: 8 Hour
Replicate 140.691949287978
Replicate 246.061969123042
Replicate 340.267372425355
Condition 3: 24 Hour
Replicate 130.060376935064
Replicate 230.008929019635
Replicate 328.413048289992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10849.p1 GENE.S_Transcript_10849~~S_Transcript_10849.p1 ORF type:complete len:577 (+),score=109.21,TPR_12|PF13424.2|1.4e-10,TPR_12|PF13424.2|3.8e-11,TPR_12|PF13424.2|1.4e-09,TPR_12|PF13424.2|0.0018,TPR_12|PF13424.2|22,TPR_10|PF13374.2|0.12,TPR_10|PF13374.2|0.52,TPR_10|PF13374.2|0.00063,TPR_10|PF13374.2|0.016,TPR_10|PF13374.2|0.00014,TPR_10|PF13374.2|0.02,TPR_10|PF13374.2|4e-06,TPR_10|PF13374.2|7.9e+02,TPR_1|PF00515.24|0.0013,TPR_1|PF00515.24|1e+02,TPR_1|PF00515.24|0.27,TPR_1|PF00515.24|0.00042,TPR_1|PF00515.24|11,TPR_1|PF00515.24|2.1e+02,TPR_7|PF13176.2|0.14,TPR_7|PF13176.2|12,TPR_7|PF13176.2|43,TPR_7|PF13176.2|0.00021,TPR_7|PF13176.2|4.6,TPR_7|PF13176.2|1.4e+02,TPR_2|PF07719.13|0.22,TPR_2|PF07719.13|3.5e+02,TPR_2|PF07719.13|11,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|3.8e+03,TPR_2|PF07719.13|15,TPR_2|PF07719.13|58,TPR_11|PF13414.2|0.024,TPR_11|PF13414.2|0.031,TPR_11|PF13414.2|0.00019,TPR_11|PF13414.2|2.7,TPR_11|PF13414.2|1.4,TPR_14|PF13428.2|12,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|76,TPR_14|PF13428.2|0.12,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|8e+03,TPR_8|PF13181.2|0.1,TPR_8|PF13181.2|8,TPR_8|PF13181.2|31,TPR_8|PF13181.2|19,TPR_8|PF13181.2|4.5e+02,TPR_8|PF13181.2|1.4e+03,TPR_5|PF12688.3|2.7e+02,TPR_5|PF12688.3|5.9e+02,TPR_5|PF12688.3|4.7e+02,TPR_5|PF12688.3|0.00021,TPR_5|PF12688.3|2.1e+02,TPR_6|PF13174.2|43,TPR_6|PF13174.2|1.8,TPR_6|PF13174.2|2.8e+02,TPR_6|PF13174.2|13,TPR_6|PF13174.2|2.9e+03,TPR_6|PF13174.2|2.6e+03,TPR_17|PF13431.2|15,TPR_17|PF13431.2|74,TPR_17|PF13431.2|5.5,TPR_17|PF13431.2|1.5e+02,TPR_19|PF14559.2|2e+03,TPR_19|PF14559.2|1.2e+02,TPR_19|PF14559.2|27,TPR_19|PF14559.2|0.22,TPR_19|PF14559.2|5e+02,TPR_19|PF14559.2|1.1e+02,TPR_4|PF07721.10|5.5e+02,TPR_4|PF07721.10|1.2e+02,TPR_4|PF07721.10|37,TPR_4|PF07721.10|24,TPR_4|PF07721.10|1.5e+02 S_Transcript_10849:81-1811(+)
ATGGCAACTGCGCCTTCCTTTACTCACAGTCACAGAATGGGATCCTTATGCTTTCGACCACATTTGAACTCGTTAGCTAGATGGAGCTTGTGCTTTCCCGTTTGCGTCCAGCATCCAAAATCTGGTGCCAAGCTTTATATGGTACCCAGTGTAACTATTGCCCGGTTTCGTTCATTGACTGTTTGTGCTAAGACTGAATCACCCACATTACACAATGCCATAATGGGGAATGGCATCGGCTCTAGTGTTCCGTCTCCTGCAAACAACCAAAGGTCTGACCCTTTGGTTGATAGCTCAAGTCGCTCCTTGAACAATGCAAATGATTTTGAGAGGCATCTGCAAGAGTTATTTGATGAAGTCAAAACTTTGATTTCAACAGGGAAGAAAAACGATGCTATAGATTTACTTCTAGCAAATTATCAAGCAGTAAAAGAGCAGTTAGACGCAGGATTTTCAGGCATTGAAGAAGCTGCTATACTCGATATTATTGCTCTGGGCTATGTAGCTGTTGGTGACGTTAAGATGGTTGGATCTGTAATAGATTTGATGAGCAAAATTGTTGATAATTTGGACGATGGAGAAATGGTTCTGGACTCAGTACTCATGCACATGGGAAGCATGTATGCATCACTGGGAAAATTTGAGAAATCCATGCTCATGTATCAGAGGGCCCTCAGAATACTTGAAAACTTTTATGGTGAAAATGGAATATTTCTTGTGACACCATTGTTGGGTTTAGCAAAAGTTTTTGGTTCAACTGGAAGAGCTGTTGAAGCAGTAGAAATTTACCAACGTGTGATTACCATCATGGAGACCAGCCATGGTGCTGATACTGCTGATCTTGTGTTACCTTTATCTAGCCTTGGCCATATCCTACTCAGTCAAGGAAAAACTGATGAAGCGGAATATCCTTTCAGAAGGATTTTGAATCTGTACTCAAGGTTACATGGAGAAACTGATGGAAGAGTTGGCATGGCTCTTTGTTCCCTAGCCCATGTGAAATGTGCTCAGGGGAATTCAGATGAAGCCATTGACTTATACAGAAGAGCTCTTCAGGTTATTAAGGATTCGGGCTACATGGGATTGGATGACAACATTATGGAGAAGATGAGGATAGATCTGGCAGAATTACTTCACATAGTTGGAAGAGGAAATGAAGGACGGGAACTATTGGAAGAGTGCTTGATGATCACTGAGAAGTATAAAGGGAAGGATCATCCTAGCCTAGCTACCCACTTTATAAACCTTGCAACCTCTTATTCATTCTCGAAGAATTATGCCGAAGCAGAGCGCTTGCTCAGGATGTCTTTGCGGGTCATGATGAAGTCTGTGGGTCCTGTTGATCCATCTATCACCTTTCCTATGTTGCAACTTGCAGTTACTCTATTTAACTTAAAACGGGATAAAGAAGCAGAGAGGCTTGCTATTGAAGTTCTGCAAATCCGTGAGGCAGCATTTGGAAAAGAATCCCTTCCAGTTGGGGAGGCACTTGACTGTCTGGTGTCAATACAGACAAGATTAGGGGAGGACAACGCAAAGTTACTCGAGTTTCTCATAAGGGTGCTCGGAATTCAAGAGAAAGAGTTTGGTTATGAGAGCGAGGAAGTGATGCTAACCTTGAAAAAAATCCTATTCTACATGGATAAATTAGGGAGGAAGCAAGAGAAGTTTCCAATTCAGAGAAGATTATCTGTGCTGAGGGGAAAGTACAGAAATAGGGTACAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10849.p1 GENE.S_Transcript_10849~~S_Transcript_10849.p1 ORF type:complete len:577 (+),score=109.21,TPR_12|PF13424.2|1.4e-10,TPR_12|PF13424.2|3.8e-11,TPR_12|PF13424.2|1.4e-09,TPR_12|PF13424.2|0.0018,TPR_12|PF13424.2|22,TPR_10|PF13374.2|0.12,TPR_10|PF13374.2|0.52,TPR_10|PF13374.2|0.00063,TPR_10|PF13374.2|0.016,TPR_10|PF13374.2|0.00014,TPR_10|PF13374.2|0.02,TPR_10|PF13374.2|4e-06,TPR_10|PF13374.2|7.9e+02,TPR_1|PF00515.24|0.0013,TPR_1|PF00515.24|1e+02,TPR_1|PF00515.24|0.27,TPR_1|PF00515.24|0.00042,TPR_1|PF00515.24|11,TPR_1|PF00515.24|2.1e+02,TPR_7|PF13176.2|0.14,TPR_7|PF13176.2|12,TPR_7|PF13176.2|43,TPR_7|PF13176.2|0.00021,TPR_7|PF13176.2|4.6,TPR_7|PF13176.2|1.4e+02,TPR_2|PF07719.13|0.22,TPR_2|PF07719.13|3.5e+02,TPR_2|PF07719.13|11,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|3.8e+03,TPR_2|PF07719.13|15,TPR_2|PF07719.13|58,TPR_11|PF13414.2|0.024,TPR_11|PF13414.2|0.031,TPR_11|PF13414.2|0.00019,TPR_11|PF13414.2|2.7,TPR_11|PF13414.2|1.4,TPR_14|PF13428.2|12,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|76,TPR_14|PF13428.2|0.12,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|8e+03,TPR_8|PF13181.2|0.1,TPR_8|PF13181.2|8,TPR_8|PF13181.2|31,TPR_8|PF13181.2|19,TPR_8|PF13181.2|4.5e+02,TPR_8|PF13181.2|1.4e+03,TPR_5|PF12688.3|2.7e+02,TPR_5|PF12688.3|5.9e+02,TPR_5|PF12688.3|4.7e+02,TPR_5|PF12688.3|0.00021,TPR_5|PF12688.3|2.1e+02,TPR_6|PF13174.2|43,TPR_6|PF13174.2|1.8,TPR_6|PF13174.2|2.8e+02,TPR_6|PF13174.2|13,TPR_6|PF13174.2|2.9e+03,TPR_6|PF13174.2|2.6e+03,TPR_17|PF13431.2|15,TPR_17|PF13431.2|74,TPR_17|PF13431.2|5.5,TPR_17|PF13431.2|1.5e+02,TPR_19|PF14559.2|2e+03,TPR_19|PF14559.2|1.2e+02,TPR_19|PF14559.2|27,TPR_19|PF14559.2|0.22,TPR_19|PF14559.2|5e+02,TPR_19|PF14559.2|1.1e+02,TPR_4|PF07721.10|5.5e+02,TPR_4|PF07721.10|1.2e+02,TPR_4|PF07721.10|37,TPR_4|PF07721.10|24,TPR_4|PF07721.10|1.5e+02 S_Transcript_10849:81-1811(+)
MATAPSFTHSHRMGSLCFRPHLNSLARWSLCFPVCVQHPKSGAKLYMVPSVTIARFRSLTVCAKTESPTLHNAIMGNGIGSSVPSPANNQRSDPLVDSSSRSLNNANDFERHLQELFDEVKTLISTGKKNDAIDLLLANYQAVKEQLDAGFSGIEEAAILDIIALGYVAVGDVKMVGSVIDLMSKIVDNLDDGEMVLDSVLMHMGSMYASLGKFEKSMLMYQRALRILENFYGENGIFLVTPLLGLAKVFGSTGRAVEAVEIYQRVITIMETSHGADTADLVLPLSSLGHILLSQGKTDEAEYPFRRILNLYSRLHGETDGRVGMALCSLAHVKCAQGNSDEAIDLYRRALQVIKDSGYMGLDDNIMEKMRIDLAELLHIVGRGNEGRELLEECLMITEKYKGKDHPSLATHFINLATSYSFSKNYAEAERLLRMSLRVMMKSVGPVDPSITFPMLQLAVTLFNLKRDKEAERLAIEVLQIREAAFGKESLPVGEALDCLVSIQTRLGEDNAKLLEFLIRVLGIQEKEFGYESEEVMLTLKKILFYMDKLGRKQEKFPIQRRLSVLRGKYRNRVQY*

Click here to download the sequence:
Link to NCBI Protein BLAST