Transcript Information: S_Transcript_108498.p1


Annotated TAIR IDAT4G32730.2
Annotated Gene NameHomeodomain-like protein
Annotated Gene Symbol(s)PC-MYB1, MYB3R-1, ATMYB3R-1, ATMYB3R1
Annotation TypeOrtholog
Chromosome Positionchr4:15791039-15795643 | Forward length=995
E-Value9E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6091055200164
Replicate 24.6007712821358
Replicate 33.9507662131694
Condition 2: 8 Hour
Replicate 14.4267871843148
Replicate 22.9051594916043
Replicate 35.0107395317871
Condition 3: 24 Hour
Replicate 11.8221324617747
Replicate 24.0601520264736
Replicate 33.3470011532856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108498.p1 GENE.S_Transcript_108498~~S_Transcript_108498.p1 ORF type:complete len:1055 (+),score=226.78,Myb_DNA-binding|PF00249.27|5e-17,Myb_DNA-binding|PF00249.27|2.7e-19,Myb_DNA-binding|PF00249.27|2.2e-14,Myb_DNA-bind_6|PF13921.2|7.3e-17,Myb_DNA-bind_6|PF13921.2|1.4e-18,Myb_DNA-bind_6|PF13921.2|1.2e-06,SLIDE|PF09111.6|1.1,SLIDE|PF09111.6|0.088,SLIDE|PF09111.6|3.3e+02 S_Transcript_108498:388-3552(+)
ATGGAAACTGACAGGAAAATAGCTGCATCACTTCCGCCTGCGCCTCCTCCTCCAAGTGGGTCCAACAATGATTTCCCTCGAGCCCGACCTATGCATGGGAGAACCACCGGCCCCACAAGGCGATCAACGAGGGGTCAATGGACTCCTGAGGAGGATGAGATTTTGCGCAAGGCTGTCCAGCGTTACAAAGGAAAAAACTGGAAGAAAATAGCTGAATGCTTCAAGGACAGAACCGATGTCCAATGCTTGCACAGGTGGCAGAAAGTCCTCAACCCAGAGCTCATCAAGGGTCCCTGGTCTAAAGAGGAGGACGAAATAATTATACAATTAGTGAACAAATACGGGCCAAAGAAATGGTCCACCATTGCTCAGCATCTGCCAGGACGTATAGGGAAACAGTGCAGAGAAAGGTGGCATAACCATCTTAATCCTTCCATAAACAAGGAGGCATGGACTCAAGAAGAAGAGCTTATTCTAATTCGAGCTCATCAGGTGCATGGGAATAGGTGGGCAGAACTCACAAAGTATTTGCCTGGAAGGACCGACAATGCTATCAAAAATCATTGGAATAGTTCTGTGAAAAAGAAACTGGATTCTTATATTGCTTCAGGGCTGCTTGCGCAGTTCCAAGGCCTGCCGGTGGTTAGCCATCAAAATCAATCCATACCTGGAGCTTCCCTGCAAGTTCACCATAGCAGTGTAGATGGTAGTGTTAGCAAAGACGGAACAGAGGCAGAGGAAAATTCAGAATGCAGTCAAGTTGGCTGCTCTCAAACTGCAAGTGACATGTCTAACTCAGCTTGCCAAATGAGAGAGGAGTTGCTTTTGTCTGAAGAGTCAGATCATGGAAAGGTGCAAGCTACTAGTCCAACAGCATCATATCCTGAGCAATACTATACTTCTCTTGACGACATCACCTTTACCATTCCTGATATACCTTATGAGTTCAGCTGCTCTTCTAAATTCCTTGATGAGACCTATCGCAAAGATCCTGGTACTTGTGCAACCAGAGAGTGCAACTTTGGTGCAATTAGCTTACCAAGTGTCCCCTCCTTGGATTTTGCTGCAGACTCGTCCAATATATCAGGAAATTATTTTCTTGCTGACGCAAAGCAAGAAATAGCTCATGATCCTTCCCACCATTCGACTGCATATACTACATCAGCTTTGGTGAATAACGTGGCTATGGAATCTGAATTCCATGGGGAGAAGCTGACAGCAGCAGAAGGCTGTTCCCAAGTTACAATCCCACAGGAAGGTGGTGTTGGTTATCATTCCTCTGCAAATCTTACCAAAGACATTATTGATATGGATAGATACAGAGATTCACTAGGTTTCCAGTCTAGTTTCCAAGTATCTGAAACAGGTGGAAGCATAACTTTGCAGCCTTATAATACTTTGACTGGTGCTGCAGAGGAAGCTTCACCATGTCATAACCTTCCTTCTGTTCCTTTGGAGGTTTCAGTAGGAAATGATCTAATGATGTGCAACAATCAGATAAATGGCAATTTGACCTTATCTCGTCCAAAGGAGATTGATTCAAATGCAGAGGAGGGACTCATTAACACACGTACTAATGCTGCTTCACCATGCCATGATCATACAGATATTATGAATGCATCAAAATTAGTCCCTGTAAATACATTTGGCTCTGAAACTCCTGATAGCCAGAAAATGCATACTCCTGTAGTCGAAAAAGCAGTTGAGGAGCGCACTGGTGATCAGGGGGCAGGGACCTTGTGCTATGAACCTCCTCGTTTTCCTTCTTTGGACATTCCCTTTTTTAGTTGTGACCTTGCTCATTCTGGTACGGATATGCAGCAAGATTTCAGTCCTCTAGGAATCCGCCAGCTAATGATGTCTTCTATGAATAGTCTTACTCCCTTTAAGCTGTGGGATTCACCATCTTCTGATGAAAGTGCAGATGCTGTATTGAAAAGTGCCGCTAAAACTTTTGTCCATACACCTTCCATCTTAAAGAAGAGACGTCGTGACCTGTTATCTCCTTTGTCACCTTTTTCAGAAAGAAGATATGACAAAAAGATAGGAAGTGATGTAAATGAAGGATTTCTGTGCACCTCCAGGTTGACCAAAGAGTTTTCTCGTTTAGATGTTATGTTCAATGAGGCCGATGAAAACAAGGAGTCATCATCCCCATCTCATGATGAGGACATCTTTACAAAAACCTCAATTGAAGACAAGGAAAATATTTGCCCAGCATCAGAAAGGCAAACAAAAGAGGCAAATCATAACCATGATTGCAGAGAAAAAGCTTCAGAAGAGGAGGCGAACAAAACTGAGATAGTGGACAAGGAAAGGGAAGGTGTTCTTGACCGTGACTCTGCATTAACAGTCTATGAAGATCGTGCTTCAGAAACACCTAGAGGAATACTGGTTGAATGTCACCTAAATGATACACAGTTCTCTAATTCCGATGGAACCAGACCTAAAGAAGGACTGAAGTCAAGCAACATAGATTCAGAAATTCATCAAAGCTCCAATAATGCTTCTAAAAATTTTGTTACATCAGAGTCAGGACCTGATAAGGATGGATCTGTTTTAAGCCCCCAGTCCATTGGTCGAAAGAACGAAAGGAAGAATTCATCTATCCACTCAGTTTCTGCAATATCTTCAGTCATGGTTGATAGTCTTGTTAATGAAGTTGGTGCCGAGAATCTAAACATCTTTGGTGGAACTCCGTTCAGACGAAGTATTGAATCTCCTTCAGCATGGAAGTCGCCTTGGTACTTCAGCTCTCTTGTTTCTTGCCCAAGGTTGGATGGAGACTTAACAATAGAGGATATAGGAATTTTCATGAGCCCAGGAGACAGGAGCATTGATGCAATAGGGTTGATGAGGCAGATAAATGAGCAAAGTGCAGATGCATATGCTGATGCTCGGGAAGTATTGGGAAGCGATACTCCAGAAAGCATACTAAGGCAAAGATGCTCTAAAAACCAAGACCCAGAAAGAGAGGGCAATAATGTCACTGACAGCCAGCATGCAAGCCGTGTCCGTTTGGCATCGAATGTCTTGACTGAACGGCGTATCCTTGATTTCAGCGAATGCGGGACACCGGCAAAATCTGCTGCTGCTGAGAAGGGGAGGTGTCTTAGCGGCACACGTTTGTCAAGTCCATCTTGTTTGCTAAAAAGTTATAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108498.p1 GENE.S_Transcript_108498~~S_Transcript_108498.p1 ORF type:complete len:1055 (+),score=226.78,Myb_DNA-binding|PF00249.27|5e-17,Myb_DNA-binding|PF00249.27|2.7e-19,Myb_DNA-binding|PF00249.27|2.2e-14,Myb_DNA-bind_6|PF13921.2|7.3e-17,Myb_DNA-bind_6|PF13921.2|1.4e-18,Myb_DNA-bind_6|PF13921.2|1.2e-06,SLIDE|PF09111.6|1.1,SLIDE|PF09111.6|0.088,SLIDE|PF09111.6|3.3e+02 S_Transcript_108498:388-3552(+)
METDRKIAASLPPAPPPPSGSNNDFPRARPMHGRTTGPTRRSTRGQWTPEEDEILRKAVQRYKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELIKGPWSKEEDEIIIQLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEELILIRAHQVHGNRWAELTKYLPGRTDNAIKNHWNSSVKKKLDSYIASGLLAQFQGLPVVSHQNQSIPGASLQVHHSSVDGSVSKDGTEAEENSECSQVGCSQTASDMSNSACQMREELLLSEESDHGKVQATSPTASYPEQYYTSLDDITFTIPDIPYEFSCSSKFLDETYRKDPGTCATRECNFGAISLPSVPSLDFAADSSNISGNYFLADAKQEIAHDPSHHSTAYTTSALVNNVAMESEFHGEKLTAAEGCSQVTIPQEGGVGYHSSANLTKDIIDMDRYRDSLGFQSSFQVSETGGSITLQPYNTLTGAAEEASPCHNLPSVPLEVSVGNDLMMCNNQINGNLTLSRPKEIDSNAEEGLINTRTNAASPCHDHTDIMNASKLVPVNTFGSETPDSQKMHTPVVEKAVEERTGDQGAGTLCYEPPRFPSLDIPFFSCDLAHSGTDMQQDFSPLGIRQLMMSSMNSLTPFKLWDSPSSDESADAVLKSAAKTFVHTPSILKKRRRDLLSPLSPFSERRYDKKIGSDVNEGFLCTSRLTKEFSRLDVMFNEADENKESSSPSHDEDIFTKTSIEDKENICPASERQTKEANHNHDCREKASEEEANKTEIVDKEREGVLDRDSALTVYEDRASETPRGILVECHLNDTQFSNSDGTRPKEGLKSSNIDSEIHQSSNNASKNFVTSESGPDKDGSVLSPQSIGRKNERKNSSIHSVSAISSVMVDSLVNEVGAENLNIFGGTPFRRSIESPSAWKSPWYFSSLVSCPRLDGDLTIEDIGIFMSPGDRSIDAIGLMRQINEQSADAYADAREVLGSDTPESILRQRCSKNQDPEREGNNVTDSQHASRVRLASNVLTERRILDFSECGTPAKSAAAEKGRCLSGTRLSSPSCLLKSYR*

Click here to download the sequence:
Link to NCBI Protein BLAST