Transcript Information: S_Transcript_108533.p1


Annotated TAIR IDAT4G00980.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:422732-424580 | Reverse length=488
E-Value7E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3396045041917
Replicate 22.5052984479229
Replicate 31.9591184850711
Condition 2: 8 Hour
Replicate 12.6559094167858
Replicate 22.212600414918
Replicate 33.8259213649966
Condition 3: 24 Hour
Replicate 12.1604829825862
Replicate 22.32449349501
Replicate 32.6792647902871


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108533.p1 GENE.S_Transcript_108533~~S_Transcript_108533.p1 ORF type:3prime_partial len:273 (+),score=65.80,UBN2_2|PF14227.2|1.6e-20,UBN2|PF14223.2|2.1e-13,UBN2_3|PF14244.2|0.24,UBN2_3|PF14244.2|0.002 S_Transcript_108533:91-906(+)
ATGTCTTCTTCCAATAATTTGAAATTGCTTCCTGACATTGGTAACCTTCAACCCCTTGATGGATCAAATTATAAGAGATGGTCGAATCGTATGTTAATCTACTTTGAACAACTAGAAATAGATTATGTACTTTTCAATGATCCACCAAAACCTAATACTTCTGAGAACCAACCTGTGACTCCGGGTTCCGGGACATCTACCATTGTGGTAACTCCTCCACCATCCGGAGACAAGGGAAAGGGTATTGATGATTCTGATGAGATGGTACAGAAGTATGAGAAGGACAACAAACTAGCCAAAAACATGTTGTTGAGCCGTATGGTTGATTCTGTGTTTGATTTGTACTATACACAAAAATCTGCCAAAGCGGTTTGGGAAGCGTTAGAGAAGAAGTATGGGGCTGATGATGCTGGGAAGAAAAAGTATGTGGTGGGAGAATGGTTGAAGTTTAAGATGGACGAGAAGAAGCCCATCATGGAACAAGTCCACCAATACGAGAATCTGGTTTCTGAGATCCTAGCTGAGGGGATGAAGATGTGTGAGATTCTGCAGGCTAATGTATTGATCGAGAAGTTGCCAGAGAAGTGGTCGGATTACCGTAACCATCTCAAGCACAAAAAGAGAGACCTAACCCTGCAGGAGTTGATCTCCCACATGAAGATAGAGGAGGCTAATCGCCTCAAAGATAAGAACACTATCCCTTCTAATGAATTGTCTGTTAAAGCTAACATTGTGGAATCTTCTGGTGGTTCCAAAAATGACAGGTCTAAGGGTCCTGACAAAACCGGAAAGGGCAAGCAGTCCAACTACAACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108533.p1 GENE.S_Transcript_108533~~S_Transcript_108533.p1 ORF type:3prime_partial len:273 (+),score=65.80,UBN2_2|PF14227.2|1.6e-20,UBN2|PF14223.2|2.1e-13,UBN2_3|PF14244.2|0.24,UBN2_3|PF14244.2|0.002 S_Transcript_108533:91-906(+)
MSSSNNLKLLPDIGNLQPLDGSNYKRWSNRMLIYFEQLEIDYVLFNDPPKPNTSENQPVTPGSGTSTIVVTPPPSGDKGKGIDDSDEMVQKYEKDNKLAKNMLLSRMVDSVFDLYYTQKSAKAVWEALEKKYGADDAGKKKYVVGEWLKFKMDEKKPIMEQVHQYENLVSEILAEGMKMCEILQANVLIEKLPEKWSDYRNHLKHKKRDLTLQELISHMKIEEANRLKDKNTIPSNELSVKANIVESSGGSKNDRSKGPDKTGKGKQSNYNK

Click here to download the sequence:
Link to NCBI Protein BLAST