Transcript Information: S_Transcript_108772.p1


Annotated TAIR IDAT1G04860.1
Annotated Gene Nameubiquitin-specific protease 2
Annotated Gene Symbol(s)UBP2, ATUBP2
Annotation TypeOrtholog
Chromosome Positionchr1:1369306-1372290 | Reverse length=961
E-Value2.9E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7047080504128
Replicate 26.2685984485962
Replicate 36.7318783884528
Condition 2: 8 Hour
Replicate 18.5387811583263
Replicate 28.1208227114882
Replicate 37.7806076697657
Condition 3: 24 Hour
Replicate 17.3994296960051
Replicate 26.2331210806537
Replicate 36.2991354581028


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108772.p1 GENE.S_Transcript_108772~~S_Transcript_108772.p1 ORF type:complete len:989 (+),score=261.45,UCH|PF00443.25|1.5e-50,UCH_1|PF13423.2|4.4e-09,UCH_1|PF13423.2|4.3e-11,zf-UBP|PF02148.15|2.3e-13,zf-UBP|PF02148.15|1.2e+04,zf-UBP|PF02148.15|7.8e+03,zf-UBP|PF02148.15|4.5e+03 S_Transcript_108772:445-3411(+)
ATGGGGAAGAGGGTAAAGAAGAAGGCTCGTAATGCTATCAAGGAGAAGCGTGTTCCAACCTCTTCTCCCAAAGCAGTTCCCCAGGAGGAGAATGAGAATCAACCCACTACGGAGACTGTTGAGGATGGAGTTCCGGTGGAGAAGGAGAGGAGTGTGTGTGTTCATCTTGACAAAGCTCTTGATTTGGCTCAAGTTTCTTCTAAACTCAGGTCTGCCGAGTCTCTTAGTTGCGAGGACTGCAGAGATAGTGCACTCGACAGAAGGTCTGGTAAAGGCAAGGGAAAACATGGTAAGAAGAAGGGGGCTTCTGAACCCAAAGCTGATTCTAAAGCCACTTGGGTTTGTTTGCAATGTGGCCATTTCTCATGCGGAGGCGTAGGTTTACCTAATAATCCTCAGTGTCATGCTCTTCGTCATGCTAGACAAAGGCGCCACCCGTTGGTATTCCAAGTTGAGAACCCTCATCTGAGGTGGTGCTTCTCTTGCAGCACTCTTCTCCCGGTAGAAAACGGTGAACAGGGAGATGTCTTATCAGATATTGTCAAGCTATTGAAGAAGCCCTCTCCCAAGGCGAGCTCCTTGGATGTTGAAGATGTTTGGTTTGGGAGTGGCGGTGCTAGTATTGATTATAAATTGGATGCCAAAGAAGTCAATGTGGTGATCGGAAAAGGTTCTTATGCTGTGAGAGGGTTGGTCAATCTTGGTAATACTTGTTTCTTCAACTCTGTTTTGCAGAATCTGCTATCAATGGATATATTGCGGGAGCACTTCTTGATGCATGATGGGACCACAGGGCCATTATCAAGTGCCATGAGGAAGATTTTTGTGGAAACAAACATTGAGACAGGCCAAAGAGTCACAAATCCCAGGTCACTCTTTGGATGTGTTTGTGCCAAAGCACCTCAGTTTAGGGGATTCCAGCAGCAGGACAGTCATGAATTGCTCCGTTGTTTGCTTGACGGGCTGTCTACTGAAGAGTATAGTGCAAAGAAGTTGAATCGTTCTTCTTCAGAAGATGAGGAATCTCGACCTGGAAAACCCACTTTCGTTGATTCCATATTTGGGGGTCAACTCTCAAGCACTGTCCAGTGTGTTGAATGTGGGCACTCTTCTGTGGTGTATGAACCTTTTCTCGACCTCTCACTTCCTCTTCCTAGTAAGAAACCTCCGGCTAAGAAGGCTCCACCAGCTTCTCGATTGAGGAAGACCAAGCTACCTCCCAAAAGAGCTGGCAGGACTCGCCCAAGGCCTAACAAAGATGGAGATTCAGCTCCTTTTCTTAGTACTTGTAATCCTTCAACCAGCAGCGAGTCTTCTACTGGTCATAAGGGGGCTTTGGGCAGCTGTTCTTCATCAGAACAGCCTGTTGAATCTGGCAATGTGGTTGAGGATAATGGTTGTTCCACTTCCCAGAATTTTGATACCTCCTCTGAACAAGTGTACATCAGCAGACAGATTCCTCAAGCTGGTGAGCAGGACGGTGATGGATTTTCCAAGATGGGTAGTCCTGACCCAGCATCCAAAACTCAGAGTGGTGGCCAAGAAGATGATGGCTTGGCTTGGTTGGATTATCTTGACTCAGTGCCGCTGCTAGATGACCAAGATTTGGCTGCAGAGAACAAGGATATTCCAGTAAGCCATGATTTGGGCAGCCTTAATGTTGAGAGGAATGCTGTCATTGATACAGCTGATACAAGTGGTGAGGCTAGTGTGCAACCTGAGGATCAATATCTTAAGTCTGAATCAACAGTTGACGATTGGCAAAATGAGGTTCCTCAGCAGGTTCAGGACAATGAAGTCTTATTGCTTACCTATAAAGAAGATAGTCCCGCTGCCGTGGAAGGGATGTTTGTAGATGCTGAGACATCTGGGCCGGTGGGTGGTGGAGAAGATACTCTAGGTTTTGATGGCTTAGGTGACTTGTTCAACGAGCCTGAGGTTGAAGTTTCTACCAGTTCTGTCGTGAATAACCAAAATGGTTTCACCCCTGGCAACTGCAGTGAGTCTGATCCAGATGAAGTTGATGACACAAATTCACCTGTATCCATTGAGAGCTGTTTGGGGCATTTTGTAAAGCCTGAGCTCCTCTCTGGTGAGCATGCTTGGCATTGTGAAAACTGTTCAAAATTAGCTGTTGAGGAAAAACGAAAAAGAAAGAGACAGCTGAAAAGTAAATCCCTCATTCAGACAAAAGAATTTCCAAATTCTGAAGTCTTGCAAAGTAGTGAATCATCGCCGGACTGTTCTACAAGTTTTGTGGCTGTTTATAACAATGGTAGCTGTAATCCTGATGATAATTTGAACAAGCTGGATACCCGCCAAACCATCAATTCATTTGAACCGCAGATGGAACAAGAAAGTTGCAAGGCAGAAAACCACCTCTGTGCCTCAGCTGGTCTGGGATCAGCTGATAAAGCAAGCGTAAATGATAAATCCCTTGATTCACAAAGTGAGTTATGTAATCATGTACCTGCGGAAGAGCTATCCAGAGTATGTGACAAGCAGGATTCAGGAGAGGACGAGGATGTAGAAGTTGATTCCAAAACTGTTAAGGTGATGAGGGATGCCAAGAAGAGGATACTTATCAACAAGGCCCCTCCTATTTTGACAATTCACCTGAAGCGCTTTGGCCAAGATGCGCGTGGTCGTTTAAGTAAATTGAATGGCCATGTTGGTTTTCAGGAAATAATTGATCTCCAACGCTACTTGGATCGCAGGTCCAGTGACACTGAAAATTGCATTTACCATCTGACTGGGGTGGTGGTGCATTCTGGATCAATGAGAAGCGGTCACTACATTGCATATTTTAGAGGAAGTGAAAGACGGAGAGGGAGATCAGAAGAAGAGAATGGACATAGATGTTCTGTGTGGTACTATGCGAGTGATGCGCATGTTCGTGAGACTACCTTGGAGGAAGTCTTCAGTTGCGAGGCTTACCTTCTGTTTTATCAGAAAGTGAAGTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108772.p1 GENE.S_Transcript_108772~~S_Transcript_108772.p1 ORF type:complete len:989 (+),score=261.45,UCH|PF00443.25|1.5e-50,UCH_1|PF13423.2|4.4e-09,UCH_1|PF13423.2|4.3e-11,zf-UBP|PF02148.15|2.3e-13,zf-UBP|PF02148.15|1.2e+04,zf-UBP|PF02148.15|7.8e+03,zf-UBP|PF02148.15|4.5e+03 S_Transcript_108772:445-3411(+)
MGKRVKKKARNAIKEKRVPTSSPKAVPQEENENQPTTETVEDGVPVEKERSVCVHLDKALDLAQVSSKLRSAESLSCEDCRDSALDRRSGKGKGKHGKKKGASEPKADSKATWVCLQCGHFSCGGVGLPNNPQCHALRHARQRRHPLVFQVENPHLRWCFSCSTLLPVENGEQGDVLSDIVKLLKKPSPKASSLDVEDVWFGSGGASIDYKLDAKEVNVVIGKGSYAVRGLVNLGNTCFFNSVLQNLLSMDILREHFLMHDGTTGPLSSAMRKIFVETNIETGQRVTNPRSLFGCVCAKAPQFRGFQQQDSHELLRCLLDGLSTEEYSAKKLNRSSSEDEESRPGKPTFVDSIFGGQLSSTVQCVECGHSSVVYEPFLDLSLPLPSKKPPAKKAPPASRLRKTKLPPKRAGRTRPRPNKDGDSAPFLSTCNPSTSSESSTGHKGALGSCSSSEQPVESGNVVEDNGCSTSQNFDTSSEQVYISRQIPQAGEQDGDGFSKMGSPDPASKTQSGGQEDDGLAWLDYLDSVPLLDDQDLAAENKDIPVSHDLGSLNVERNAVIDTADTSGEASVQPEDQYLKSESTVDDWQNEVPQQVQDNEVLLLTYKEDSPAAVEGMFVDAETSGPVGGGEDTLGFDGLGDLFNEPEVEVSTSSVVNNQNGFTPGNCSESDPDEVDDTNSPVSIESCLGHFVKPELLSGEHAWHCENCSKLAVEEKRKRKRQLKSKSLIQTKEFPNSEVLQSSESSPDCSTSFVAVYNNGSCNPDDNLNKLDTRQTINSFEPQMEQESCKAENHLCASAGLGSADKASVNDKSLDSQSELCNHVPAEELSRVCDKQDSGEDEDVEVDSKTVKVMRDAKKRILINKAPPILTIHLKRFGQDARGRLSKLNGHVGFQEIIDLQRYLDRRSSDTENCIYHLTGVVVHSGSMRSGHYIAYFRGSERRRGRSEEENGHRCSVWYYASDAHVRETTLEEVFSCEAYLLFYQKVKS*

Click here to download the sequence:
Link to NCBI Protein BLAST