Transcript Information: S_Transcript_108949.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.520868422308
Replicate 223.657690007456
Replicate 322.442365595707
Condition 2: 8 Hour
Replicate 112.846620672972
Replicate 212.668396217677
Replicate 312.58405461017
Condition 3: 24 Hour
Replicate 128.161476307151
Replicate 227.032739109137
Replicate 317.3211630252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108949.p1 GENE.S_Transcript_108949~~S_Transcript_108949.p1 ORF type:5prime_partial len:83 (+),score=13.95 S_Transcript_108949:1-249(+)
GTTGAACATGCAAAGGTAGCTCAGAGTTTGAACAGTAAATTGGAAATTGCCGGTAGATATATTAAGGTTTTATCGGTCATTGAACATGTTGGCGGACAAGAAGCTGGTAAAAATGCTGCGGATTTTGATGACGATGATGGTCATGGAGTTCATGCAAAATTTTACCACAAAGATAGTGAATCTTATAAAATTAGAGGGTTTATATGCTTCACTAGGAGGCCCTACAAGATGCAAGATCGCAAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108949.p1 GENE.S_Transcript_108949~~S_Transcript_108949.p1 ORF type:5prime_partial len:83 (+),score=13.95 S_Transcript_108949:1-249(+)
VEHAKVAQSLNSKLEIAGRYIKVLSVIEHVGGQEAGKNAADFDDDDGHGVHAKFYHKDSESYKIRGFICFTRRPYKMQDRKG*

Click here to download the sequence:
Link to NCBI Protein BLAST