Transcript Information: S_Transcript_109016.p1


Annotated TAIR IDAT1G48950.1
Annotated Gene NameC3HC zinc finger-like
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18107063-18110108 | Forward length=594
E-Value1.7E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.358642526888
Replicate 215.187408625638
Replicate 315.011529370373
Condition 2: 8 Hour
Replicate 118.614255424102
Replicate 217.446573435322
Replicate 315.565525925498
Condition 3: 24 Hour
Replicate 116.358261590631
Replicate 213.352323099243
Replicate 312.669678119779


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109016.p1 GENE.S_Transcript_109016~~S_Transcript_109016.p1 ORF type:complete len:645 (+),score=146.89,zf-C3HC|PF07967.9|1.1e-31,zf-C3HC|PF07967.9|1e+03,zf-C3HC|PF07967.9|3.3e+02,Rsm1|PF08600.6|0.02,Rsm1|PF08600.6|1.4,Rsm1|PF08600.6|0.046 S_Transcript_109016:230-2164(+)
ATGGCAGAAGATACAGAAAAGAAGTTCCAGAGTATAATGGCTAAACTCTTTAACTCTCCCAAATCCAGGGATAGTTCATCAAGTGCACAGAAGGTGGGAGGTCAGAAGCGGCTATATTCAATGATGGAATCGAATTCCAAGTCCGATAAAGGTGAGGGAACAACTAGTGCAGCCGCAGCTTCGCCTCCACCGTGTAGACCTTGGGATAGGGGAGATTTGATGAGGAGGGTGGCTACTTTCAAATCCATGAAATGGTTTGCTAAACCCAAGGTTATGGATGCTATCAATTGTGCAAGGAGAGGTTGGGTCAATGTAGATATGGATATCATAGCCTGTGAAGTTTGTGGAGCACGTCTTCAGTTTTCTACCCCTTCAACTTGGAGCCAGCAACAGGTTGAAAAAGCGGCCCTAGTTTTTAGCTTGAAATTGAATAGTGGACACAAGCTATTTTGTCCGTGGATGGATAATGCTTGTGATGAAAATCTGGCACTTTTTCCACCTTTGCCAGCCCCAGTTTTGGTTGATCACTATAAAGAGCGTTTGGCTTCACTGTTGCAGCTTTCTGCTCTTCCTGTAATATCTGCCTCTGTGATTGAGATTATGATTATGAAAAGCCCTCATTTGGAACATTTTCTTAAGCAGTCAATGGCAGTCGAATGTGGTGCAGGACCTAATGGCTCTTCATGGACCGAGTATGTTGGGAATGAAATTGAAGCAGTTTCTTTCGATTCATATTATCAGGCACATAGGTTGCTGAGCTTATGTGGATGGGAACCTCGATTGCTACCATACATGGTTGACTGTGGTGACCAACGAAAAGAGATTGCTGACAATACAGACCTCTCCTGCTTGTCTCATGTAGCTGTTGGTGAGAAAAATAATAGATTGTGTGTATATGTTTCTAGTTCTGGCGAAAGTGGAAAGGAAAATGAAGAACCTGTGTCTCCAGTGGTCCATTATGATCCAAGTTCGACTGTCCTAGAGTGCAAGCTTTGTGGGGCTAGCGTTGGACTATGGTCCTTTGCAACAATTTCACGGCCTCTAGAATTAGTTAGAGTCGTTGGGTACGCTGAGATTGATGGAGGAAGCCATCATGGTAGTAAAATTTCTGGGAATGAAAATCTTGAGAACAATGGAAAAGACTCCAGTACTGTCAACAAAAAAACTTCACTATCAGGGAGAACAATGCTAAATTTTTCAATTGCAGGTGGTCCTCCTCCAACCAAACAGAATTTCAGAGCAACAGTTTCCTTGCCGGTCGTTGGCCGTAATGTGAGAGCTCGATTTTCTTCATCAGCACCAAGAAATATTATTGAAGAGGAGCATCATAATCAAGACAGCATCCAGAGTGTAGCGACAGGCTCTAGTGGCCTACTTGCTAATGAAGAAACTGGACAGTTCAATGAAGCAGCTGGTGATTCTGATTGTCCACCTGTTGGTGCTTCTGGTACAGTGTCACAAGATAATGCTGTGACATTGAATGGGAATAGTGTCGAGCTATCTACAAGATGTGAAGATGACAGCGCTAACCCACTGCAGAGGCCTACGGATGATATGGCATTGATTAAGGACATCTCAAGCACATCTAGTGCTGTCCAAAAGGATAATGGAGTGGACATAACCAAGAAGGCTTTGCAAACAGATGCTTCCACTATGAGCATAGATTCAAGGAAACATTCGTCAGATAGAAGGATGGAGTTTCATCCAATCAGGCAGCACAGACATTTTTGCCCTTGGGTTACATCTACAGGCACCACAGCCCCTGGATGGCAACAAACTTTATCGGCACTGCAGAAGGAGAAAGTGTTTTCACTGCCAGAATCTGATAATTCTCCTTCACCTCCATCCTTGATCAAGGTTGATGATCCCATTACATCTATTAGAAAGCTTTTTGAGTCTCCACCTGCTAAAAGAGCAAAACCCTCTACAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109016.p1 GENE.S_Transcript_109016~~S_Transcript_109016.p1 ORF type:complete len:645 (+),score=146.89,zf-C3HC|PF07967.9|1.1e-31,zf-C3HC|PF07967.9|1e+03,zf-C3HC|PF07967.9|3.3e+02,Rsm1|PF08600.6|0.02,Rsm1|PF08600.6|1.4,Rsm1|PF08600.6|0.046 S_Transcript_109016:230-2164(+)
MAEDTEKKFQSIMAKLFNSPKSRDSSSSAQKVGGQKRLYSMMESNSKSDKGEGTTSAAAASPPPCRPWDRGDLMRRVATFKSMKWFAKPKVMDAINCARRGWVNVDMDIIACEVCGARLQFSTPSTWSQQQVEKAALVFSLKLNSGHKLFCPWMDNACDENLALFPPLPAPVLVDHYKERLASLLQLSALPVISASVIEIMIMKSPHLEHFLKQSMAVECGAGPNGSSWTEYVGNEIEAVSFDSYYQAHRLLSLCGWEPRLLPYMVDCGDQRKEIADNTDLSCLSHVAVGEKNNRLCVYVSSSGESGKENEEPVSPVVHYDPSSTVLECKLCGASVGLWSFATISRPLELVRVVGYAEIDGGSHHGSKISGNENLENNGKDSSTVNKKTSLSGRTMLNFSIAGGPPPTKQNFRATVSLPVVGRNVRARFSSSAPRNIIEEEHHNQDSIQSVATGSSGLLANEETGQFNEAAGDSDCPPVGASGTVSQDNAVTLNGNSVELSTRCEDDSANPLQRPTDDMALIKDISSTSSAVQKDNGVDITKKALQTDASTMSIDSRKHSSDRRMEFHPIRQHRHFCPWVTSTGTTAPGWQQTLSALQKEKVFSLPESDNSPSPPSLIKVDDPITSIRKLFESPPAKRAKPSTT*

Click here to download the sequence:
Link to NCBI Protein BLAST