Transcript Information: S_Transcript_109083.p1


Annotated TAIR IDAT3G56190.1
Annotated Gene Namealpha-soluble NSF attachment protein 2
Annotated Gene Symbol(s)ALPHA-SNAP2, ASNAP
Annotation TypeOrtholog
Chromosome Positionchr3:20846119-20848356 | Reverse length=289
E-Value2E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.36317349065868
Replicate 30.37948016632923
Condition 2: 8 Hour
Replicate 10
Replicate 20.82858698665654
Replicate 30
Condition 3: 24 Hour
Replicate 10.35958655951595
Replicate 20.37306685722382
Replicate 30.31138326426069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109083.p1 GENE.S_Transcript_109083~~S_Transcript_109083.p1 ORF type:5prime_partial len:243 (+),score=58.01,SNAP|PF14938.2|5.8e-82,TPR_2|PF07719.13|16,TPR_2|PF07719.13|6.4e+02,TPR_2|PF07719.13|0.00028,TPR_2|PF07719.13|0.6,TPR_2|PF07719.13|4.7,TPR_12|PF13424.2|73,TPR_12|PF13424.2|6.2e-06,TPR_12|PF13424.2|0.0064,TPR_8|PF13181.2|11,TPR_8|PF13181.2|2.7e+03,TPR_8|PF13181.2|0.0035,TPR_8|PF13181.2|1.7,TPR_8|PF13181.2|65,TPR_11|PF13414.2|8.5,TPR_11|PF13414.2|0.00079,TPR_11|PF13414.2|0.047,TPR_11|PF13414.2|0.0067,TPR_1|PF00515.24|2e+02,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|3,TPR_1|PF00515.24|50,TPR_16|PF13432.2|53,TPR_16|PF13432.2|0.097,TPR_16|PF13432.2|1.1,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|58,TPR_14|PF13428.2|37,TPR_6|PF13174.2|30,TPR_6|PF13174.2|4.5e+02,TPR_6|PF13174.2|0.81,TPR_6|PF13174.2|0.87,TPR_6|PF13174.2|1.3e+03,TPR_6|PF13174.2|1.2e+04,TPR_6|PF13174.2|1.1e+04 S_Transcript_109083:3-731(+)
GATCAAGCTGGTTCTTCTTACATCAAACTGGCCGAGTGTCATTTGAAGCTTGATAGCAAGCATGAAGCTGCTTCTGCTTATGTGGATGCTGCAAACTCTTACAAGAAGATATCTCCTATACAGGCCATATCATGTCTACATCAAGCTGTGAATCTCTATTCTGGTATTGGGAGATTTAGCATTGCTGCAAGATATTCCAAGGAAACGGGTGAATTATACGAGCAACAGCGTAATTTTGAGGAGGCTATGAAATATTTTGAACAAGCTGCTGAGTTCTTCCAAAGCGAAGAAGCAACAACTTCCGCTAGTCAGTGCAAGCAGAAAGTTGCTCTAGTTTCTGCCCATTTGAAACAGTATCAGAAGGCGATTGAGATATTCGAACAAGTAGCACGAGAAGCTGTAAAAAGCAATTTGCTGAGGTATGGTGTTAGAGGTCATCTACTCAATTCTGGTATTTGCCATCTCTGTACTGGTGATCTTGTTGCAGCTTCCAATGCTCTGGAAAGATATCAGGATTTAGATCCCACATTTTCAAGAACTCGAGAGTATCAACTTTTCGCTGATTTGGTGGAATCATATGACGAGGAAGATGTTGAGAAGTTTACTGATGTGCTCAAGGAATATGATAGCTTAAGTCCACTGGGAACCTATGATGAATTATCTTTTGCTTTGGAGGAATGCTCGTGTTTTGACGTCTTCATGATCAATTATGCTCCCGGTCTGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109083.p1 GENE.S_Transcript_109083~~S_Transcript_109083.p1 ORF type:5prime_partial len:243 (+),score=58.01,SNAP|PF14938.2|5.8e-82,TPR_2|PF07719.13|16,TPR_2|PF07719.13|6.4e+02,TPR_2|PF07719.13|0.00028,TPR_2|PF07719.13|0.6,TPR_2|PF07719.13|4.7,TPR_12|PF13424.2|73,TPR_12|PF13424.2|6.2e-06,TPR_12|PF13424.2|0.0064,TPR_8|PF13181.2|11,TPR_8|PF13181.2|2.7e+03,TPR_8|PF13181.2|0.0035,TPR_8|PF13181.2|1.7,TPR_8|PF13181.2|65,TPR_11|PF13414.2|8.5,TPR_11|PF13414.2|0.00079,TPR_11|PF13414.2|0.047,TPR_11|PF13414.2|0.0067,TPR_1|PF00515.24|2e+02,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|3,TPR_1|PF00515.24|50,TPR_16|PF13432.2|53,TPR_16|PF13432.2|0.097,TPR_16|PF13432.2|1.1,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|58,TPR_14|PF13428.2|37,TPR_6|PF13174.2|30,TPR_6|PF13174.2|4.5e+02,TPR_6|PF13174.2|0.81,TPR_6|PF13174.2|0.87,TPR_6|PF13174.2|1.3e+03,TPR_6|PF13174.2|1.2e+04,TPR_6|PF13174.2|1.1e+04 S_Transcript_109083:3-731(+)
DQAGSSYIKLAECHLKLDSKHEAASAYVDAANSYKKISPIQAISCLHQAVNLYSGIGRFSIAARYSKETGELYEQQRNFEEAMKYFEQAAEFFQSEEATTSASQCKQKVALVSAHLKQYQKAIEIFEQVAREAVKSNLLRYGVRGHLLNSGICHLCTGDLVAASNALERYQDLDPTFSRTREYQLFADLVESYDEEDVEKFTDVLKEYDSLSPLGTYDELSFALEECSCFDVFMINYAPGLS*

Click here to download the sequence:
Link to NCBI Protein BLAST