Transcript Information: S_Transcript_109084.p1


Annotated TAIR IDAT3G56190.1
Annotated Gene Namealpha-soluble NSF attachment protein 2
Annotated Gene Symbol(s)ALPHA-SNAP2, ASNAP
Annotation TypeOrtholog
Chromosome Positionchr3:20846119-20848356 | Reverse length=289
E-Value9.3E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7213723256087
Replicate 26.7769660756871
Replicate 36.0426712082787
Condition 2: 8 Hour
Replicate 12.7657502800377
Replicate 21.1453164832625
Replicate 31.8187583280701
Condition 3: 24 Hour
Replicate 14.1005753992583
Replicate 24.3316499941142
Replicate 34.476267266437


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109084.p1 GENE.S_Transcript_109084~~S_Transcript_109084.p1 ORF type:complete len:293 (+),score=76.32,SNAP|PF14938.2|5.9e-105,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|8.7e-06,TPR_12|PF13424.2|0.009,TPR_11|PF13414.2|0.004,TPR_11|PF13414.2|0.00078,TPR_11|PF13414.2|0.067,TPR_11|PF13414.2|0.0095,TPR_2|PF07719.13|3.1e+03,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|19,TPR_2|PF07719.13|8.1e+02,TPR_2|PF07719.13|0.00037,TPR_2|PF07719.13|0.77,TPR_2|PF07719.13|6.1,TPR_16|PF13432.2|0.097,TPR_16|PF13432.2|0.13,TPR_16|PF13432.2|1.6,TPR_8|PF13181.2|1.7e+03,TPR_8|PF13181.2|15,TPR_8|PF13181.2|3.6e+03,TPR_8|PF13181.2|0.0045,TPR_8|PF13181.2|2.3,TPR_8|PF13181.2|84,TPR_1|PF00515.24|77,TPR_1|PF00515.24|2.6e+02,TPR_1|PF00515.24|1.9e+03,TPR_1|PF00515.24|0.0013,TPR_1|PF00515.24|3.8,TPR_1|PF00515.24|65,TPR_7|PF13176.2|34,TPR_7|PF13176.2|1e+03,TPR_7|PF13176.2|2.4e+03,TPR_7|PF13176.2|0.0051,TPR_7|PF13176.2|3.2,TPR_7|PF13176.2|6.4e+03,Spatacsin_C|PF14649.2|4.5,Spatacsin_C|PF14649.2|3.8e-05,TPR_6|PF13174.2|1.7e+02,TPR_6|PF13174.2|32,TPR_6|PF13174.2|1,TPR_6|PF13174.2|1.1,TPR_6|PF13174.2|1.6e+03,TPR_6|PF13174.2|1.4e+04,TPR_14|PF13428.2|5.2e+03,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|8.3e+03,TPR_14|PF13428.2|0.055,TPR_14|PF13428.2|75,TPR_14|PF13428.2|48 S_Transcript_109084:113-991(+)
ATGGAGATCAATAGTTACACAGCCAAAGCCCAAGATCGTAAAAAGGAAGCAGAGAAATTAATCAAAAGTTGGTCATTTTTTAACTCTGATTCTAAATATGAAGATGCTGCTCAACTTTATCAAAATGCTGCTACCTCCTTCAAACTCGCCAAATCATGGGATCAAGCTGGTTCTTCTTACATCAAACTGGCCGAGTGTCATTTGAAGCTTGATAGCAAGCATGAAGCTGCTTCTGCTTATGTGGATGCTGCAAACTCTTACAAGAAGATATCTCCTATACAGGCCATATCATGTCTACATCAAGCTGTGAATCTCTATTCTGGTATTGGGAGATTTAGCATTGCTGCAAGATATTCCAAGGAAACGGGTGAATTATACGAGCAACAGCGTAATTTTGAGGAGGCTATGAAATATTTTGAACAAGCTGCTGAGTTCTTCCAAAGCGAAGAAGCAACAACTTCCGCTAGTCAGTGCAAGCAGAAAGTTGCTCTAGTTTCTGCCCATTTGAAACAGTATCAGAAGGCGATTGAGATATTCGAACAAGTAGCACGAGAAGCTGTAAAAAGCAATTTGCTGAGGTATGGTGTTAGAGGTCATCTACTCAATTCTGGTATTTGCCATCTCTGTACTGGTGATCTTGTTGCAGCTTCCAATGCTCTGGAAAGATATCAGGATTTAGATCCCACATTTTCAAGAACTCGAGAGTATCAACTTTTCGCTGATTTGGTGGAATCATATGACGAGGAAGATGTTGAGAAGTTTACTGATGTGCTCAAGGAATATGATAGCTTAAGTCCACTGGATTCTTGGAAAACTGTTCTCCTATTAAGAGTAAAAGAGGCATTGAAGGCTAAGGAGCTCGACGATGATCTTACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109084.p1 GENE.S_Transcript_109084~~S_Transcript_109084.p1 ORF type:complete len:293 (+),score=76.32,SNAP|PF14938.2|5.9e-105,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|8.7e-06,TPR_12|PF13424.2|0.009,TPR_11|PF13414.2|0.004,TPR_11|PF13414.2|0.00078,TPR_11|PF13414.2|0.067,TPR_11|PF13414.2|0.0095,TPR_2|PF07719.13|3.1e+03,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|19,TPR_2|PF07719.13|8.1e+02,TPR_2|PF07719.13|0.00037,TPR_2|PF07719.13|0.77,TPR_2|PF07719.13|6.1,TPR_16|PF13432.2|0.097,TPR_16|PF13432.2|0.13,TPR_16|PF13432.2|1.6,TPR_8|PF13181.2|1.7e+03,TPR_8|PF13181.2|15,TPR_8|PF13181.2|3.6e+03,TPR_8|PF13181.2|0.0045,TPR_8|PF13181.2|2.3,TPR_8|PF13181.2|84,TPR_1|PF00515.24|77,TPR_1|PF00515.24|2.6e+02,TPR_1|PF00515.24|1.9e+03,TPR_1|PF00515.24|0.0013,TPR_1|PF00515.24|3.8,TPR_1|PF00515.24|65,TPR_7|PF13176.2|34,TPR_7|PF13176.2|1e+03,TPR_7|PF13176.2|2.4e+03,TPR_7|PF13176.2|0.0051,TPR_7|PF13176.2|3.2,TPR_7|PF13176.2|6.4e+03,Spatacsin_C|PF14649.2|4.5,Spatacsin_C|PF14649.2|3.8e-05,TPR_6|PF13174.2|1.7e+02,TPR_6|PF13174.2|32,TPR_6|PF13174.2|1,TPR_6|PF13174.2|1.1,TPR_6|PF13174.2|1.6e+03,TPR_6|PF13174.2|1.4e+04,TPR_14|PF13428.2|5.2e+03,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|8.3e+03,TPR_14|PF13428.2|0.055,TPR_14|PF13428.2|75,TPR_14|PF13428.2|48 S_Transcript_109084:113-991(+)
MEINSYTAKAQDRKKEAEKLIKSWSFFNSDSKYEDAAQLYQNAATSFKLAKSWDQAGSSYIKLAECHLKLDSKHEAASAYVDAANSYKKISPIQAISCLHQAVNLYSGIGRFSIAARYSKETGELYEQQRNFEEAMKYFEQAAEFFQSEEATTSASQCKQKVALVSAHLKQYQKAIEIFEQVAREAVKSNLLRYGVRGHLLNSGICHLCTGDLVAASNALERYQDLDPTFSRTREYQLFADLVESYDEEDVEKFTDVLKEYDSLSPLDSWKTVLLLRVKEALKAKELDDDLT*

Click here to download the sequence:
Link to NCBI Protein BLAST