Transcript Information: S_Transcript_109180.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7356305153379
Replicate 20.47962585994597
Replicate 30.40092904529566
Condition 2: 8 Hour
Replicate 10.2317977208384
Replicate 20
Replicate 30.23169399570632
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109180.p1 GENE.S_Transcript_109180~~S_Transcript_109180.p1 ORF type:3prime_partial len:92 (+),score=17.43,PIF1|PF05970.10|1.2e-17 S_Transcript_109180:421-693(+)
ATGTTGGATTTATTGCCCGATGAAAAGAAAGTAGATAAAAGCTATGATTCTGTTTGTCCTGAGGATATGCCAAATGCTGCAACTGATGAGGTGTATTTAGTTTACTTGAATATTTTGAAGTTTTCTGGTTTACCTAACGATGAAATCACGTTGAAAGTTGGTGCTCCAATCATGTTGCTTAGAAATATTGATTGCTCAGGAGTTTTATGTAATGGAACAAGATTATGTATAACCCAGTCAGGAAATAATATTATTGAAGCAGATTTACTCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109180.p1 GENE.S_Transcript_109180~~S_Transcript_109180.p1 ORF type:3prime_partial len:92 (+),score=17.43,PIF1|PF05970.10|1.2e-17 S_Transcript_109180:421-693(+)
MLDLLPDEKKVDKSYDSVCPEDMPNAATDEVYLVYLNILKFSGLPNDEITLKVGAPIMLLRNIDCSGVLCNGTRLCITQSGNNIIEADLLT

Click here to download the sequence:
Link to NCBI Protein BLAST