Transcript Information: S_Transcript_109220.p1


Annotated TAIR IDAT5G43470.1
Annotated Gene NameDisease resistance protein (CC-NBS-LRR class) family
Annotated Gene Symbol(s)RPP8, HRT, RCY1
Annotation TypeHomolog
Chromosome Positionchr5:17463130-17466658 | Reverse length=908
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7953215118971
Replicate 20.78795676991124
Replicate 30.65866914584288
Condition 2: 8 Hour
Replicate 11.7771158597611
Replicate 21.8643207199772
Replicate 32.4530142085098
Condition 3: 24 Hour
Replicate 11.1269185927687
Replicate 21.5289079238012
Replicate 32.0017495559616


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109220.p1 GENE.S_Transcript_109220~~S_Transcript_109220.p1 ORF type:complete len:252 (+),score=42.16,LRR_4|PF12799.3|4.6e+02,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|30,LRR_4|PF12799.3|2.5e+03 S_Transcript_109220:78-758(+)
ATGGCAGGATTGAGTACTACTCTTCAGGAGCTCAGCATATGGGGAATAAGCAATCAAGAACAGTTGAATGCTGTGTTTCATTGCCGGAGTATAAAGTTAGACAATCTTCAGAACCTAATATTGGACTGGCTTGAAAATTTTGATGCTGAACTACAAAATATGGAAACATTGAAGCAGTGTAAAAAGCTTCAGAAGTTGACATTAAGTGGAAAGATACAAGGAAGCAGACCCCCTGAGTTCCCACCAAACCTAGTCAAACTGGATATCAGCGGTGCAGAGCTGAAAGCAACAGATCTGATGGCCGTGTTCGGGAATTCCCTTCCTTTCTTAAGAGTTCTCAGACTGGCAAATGATGCATACATGGGCATTGAACTGACTTGCAAAGCAGGCTCGTTTCAGAATCTTGTGGAACTTACTTTTTTTTTTTTTCTGGGAAATCTGGAGCTATGGACTGTTGAAAGGGGTGCAATGCCTTGTCTCAAGCACTTTCATGTTCACTTTTGTTGGAACTTGCATAAGTTTCCTGAAGGTTGGAGGTTTGTCTCTAAGCTTGAGCAAGTTAGAGCTGTTGGAATGTCAGATCTATTTCAGGAAAGCCTCGAAATGGCTAAAAAACATCATACTGGCCTTAGAGTGGACAATATACTCGTGAGTCCTCCTTATATCTCCTGCCCCATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109220.p1 GENE.S_Transcript_109220~~S_Transcript_109220.p1 ORF type:complete len:252 (+),score=42.16,LRR_4|PF12799.3|4.6e+02,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|30,LRR_4|PF12799.3|2.5e+03 S_Transcript_109220:78-758(+)
MAGLSTTLQELSIWGISNQEQLNAVFHCRSIKLDNLQNLILDWLENFDAELQNMETLKQCKKLQKLTLSGKIQGSRPPEFPPNLVKLDISGAELKATDLMAVFGNSLPFLRVLRLANDAYMGIELTCKAGSFQNLVELTFFFFLGNLELWTVERGAMPCLKHFHVHFCWNLHKFPEGWRFVSKLEQVRAVGMSDLFQESLEMAKKHHTGLRVDNILVSPPYISCPI*

Click here to download the sequence:
Link to NCBI Protein BLAST