Transcript Information: S_Transcript_109252.p1


Annotated TAIR IDAT5G47380.1
Annotated Gene NameProtein of unknown function, DUF547
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19221472-19224471 | Reverse length=618
E-Value3E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7473182629159
Replicate 23.6214174778749
Replicate 32.1423380299132
Condition 2: 8 Hour
Replicate 12.5310438002658
Replicate 22.9377174981459
Replicate 34.7906829213216
Condition 3: 24 Hour
Replicate 12.813356207122
Replicate 21.6597235750355
Replicate 31.5286087518252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109252.p1 GENE.S_Transcript_109252~~S_Transcript_109252.p1 ORF type:3prime_partial len:396 (+),score=81.47,Lzipper-MIP1|PF14389.2|1.1e-22,DUF547|PF04784.10|5.6e+03,DUF547|PF04784.10|7.5e-07 S_Transcript_109252:100-1284(+)
ATGGTTCGTTTCAGTGTTGCTCAAGATTATGAAGGGACTTTTGGGAAAACAGAAAATGATATTCTTTCCCATCATAAGCGTTCTAAGAGTGCTTCTGATAGGAATGGTGATATTTCAAGACTAGGAGTTCCCCATCCTATTGAATGTAACCATGGCTCACCAATTGACTCACCAATTTCTTCAAGGACCTATGGTTCCCAAACAACTCATACTGGCAATTCCATTGATTCAAGTACAAGCTCATCGAACCAACGCGTCTCCTTGGAAAAGGATATACAGCTACTTCAATCGCGACTACAGCAAGAAAAATCAATGCGGATTATGCTTGAGAAAGCGATTGGCAGAGCTTCGAGTACTTTGTCTCCAGGTCACAGGCATGTTTCTTCACAGACAAAGGAGCTGATTGCTGAGATTGAGCTACTTGAACAAGAGGTTGCCAATAGGGAGCAGCACGTTCTTACTCTCTACAGGAGCATATTTGAACAGTGTGTTAGTCGGGCACCTTCTGAGCAAGGCTCAGAAATCAGTTCTCCTGCTCATACAAGAAACAAGACAAGGAAACATCCAAGTATAATTTCTAGTGCATTTTGTTCCTCGAAGAAGTTCCCTTTACGAGCTCTTTCTTCAAGGATCAGTTCTGGGAAAAAAGACGGCAAGACTAGGCTTGCCTCATCATGCATGGGGAAAATTGACATACACTATGAGAGATCTTGTTCCAGCTTGAGTAAGGGACATGCAAAGTCACCCACCAGAGAGAAAACTCCTGTTTTGCGAACTTTAAAGGATCATCTCCATCAGTGTCCCAGCAAGCTCTCTGAAGAAATGGTTAAATGCATGGCTGCAGTGTACAGCTGGCTCTACAAGGCAGAAAGATCAGGGAATAAGCAGTCATCTGCGCTCTCAGAGTCAAAGTCATATGCTAATCTTGTACGCCAGCTTCCTGGTGCAGATTACTATGCTTCCAAGCCTATGGTAGAGATATGCTTGATGCCAGCTGACAAAAGCCAGTTTGCTCATGCCTCTTATGCAATTAACAGCTACAGAACTCTTGTTGAACAACTGGAAAGGGTCAATGTGAGTCAAATGGAAGCCAAAGCCCAGATTGCTTTTTGGATCAACATCTACAACTCTCTGATAATGCATGCATATTTAGCATATGGCATCCCCCATAGCTCTCTAAGGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109252.p1 GENE.S_Transcript_109252~~S_Transcript_109252.p1 ORF type:3prime_partial len:396 (+),score=81.47,Lzipper-MIP1|PF14389.2|1.1e-22,DUF547|PF04784.10|5.6e+03,DUF547|PF04784.10|7.5e-07 S_Transcript_109252:100-1284(+)
MVRFSVAQDYEGTFGKTENDILSHHKRSKSASDRNGDISRLGVPHPIECNHGSPIDSPISSRTYGSQTTHTGNSIDSSTSSSNQRVSLEKDIQLLQSRLQQEKSMRIMLEKAIGRASSTLSPGHRHVSSQTKELIAEIELLEQEVANREQHVLTLYRSIFEQCVSRAPSEQGSEISSPAHTRNKTRKHPSIISSAFCSSKKFPLRALSSRISSGKKDGKTRLASSCMGKIDIHYERSCSSLSKGHAKSPTREKTPVLRTLKDHLHQCPSKLSEEMVKCMAAVYSWLYKAERSGNKQSSALSESKSYANLVRQLPGADYYASKPMVEICLMPADKSQFAHASYAINSYRTLVEQLERVNVSQMEAKAQIAFWINIYNSLIMHAYLAYGIPHSSLRR

Click here to download the sequence:
Link to NCBI Protein BLAST