Transcript Information: S_Transcript_109347.p1


Annotated TAIR IDAT5G67240.1
Annotated Gene Namesmall RNA degrading nuclease 3
Annotated Gene Symbol(s)SDN3
Annotation TypeOrtholog
Chromosome Positionchr5:26824454-26828098 | Reverse length=782
E-Value2.5E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.578590933391
Replicate 213.337137130055
Replicate 312.50931484359
Condition 2: 8 Hour
Replicate 112.847673674666
Replicate 213.432277974262
Replicate 310.570563771323
Condition 3: 24 Hour
Replicate 19.7138108964322
Replicate 211.285463551337
Replicate 311.370593789192


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109347.p1 GENE.S_Transcript_109347~~S_Transcript_109347.p1 ORF type:complete len:488 (+),score=125.47,RNase_T|PF00929.20|3.3e+03,RNase_T|PF00929.20|1.3e-08 S_Transcript_109347:207-1670(+)
ATGGATGAGAAGCTCGCCTCCGCAGGGAAAGACGCCCTTGTTCAAATTGTCAAGTTGGCACAGAAGCGGGGGATGGAGGGTGATAAAGGAGGATGGAAAGAATTTCTAAAAGTTTACGATAAAAAGTTTGGTGCTAGCATGAGTGACCCAGCTAGGAGGAACCCTGAAGTATTGCTTGCTTTTCTACGTACATTCAAGGAAGAGGATGATTTAAAATATTTTGCAAAAGTTCTGAAGTGCCACTCAAATCGTGAGCTGGTGAAGCAATATGTGAAGTCTGAAGATGCTACATCTCTTGAACAGAGGTTGGTCCGTTTGACCCTTGACCACCCACAATATCCAATTGAGTATTCATTTCCATCACACGAGGAGGAGTGGATTGTTACAAAACCCGGTAAGAAATCCAAGGCGGCGACTTCAAATACATTGCTGGCTGTTGATTGTGAGATGGTTCTCTGTGAAGATGGAACAGAAGCCTTAGTAAAAATATGTGTTGTTGATCGGAATTTACAGGTTAAACTCCATGAATTTGTCAATCCTGATAAAGCAATTGCAGATTACAGGACACATATCACTGGTGTTTCTGCCCAGGATTTAGATGGAATAACTTGTTCCCTTGCAGATATACAGAAATCACTGAAGAAGATGTTGAATGGGGCTATTTTAGTTGGTCATAGTCTCAGTAATGATCTGAAAGTATTGAAGGTAGATCACACAAAAGTGATAGACACGTCTTATATCTTCAAGTATGGAGAGGAATCTACTAAAAGAAGGCCTTCCTTGAATGATCTGTGTAAGTCTGTGTTGGGTTTTGAGCATCGCAAGAAGGGTGAACCACATAATTGTCTTGATGACGCTTGTGCGGCTATGAAGCTTGTGGTTGCCAAGTTCGAGAAAGGGTTTGATGATGCAATTCCTGTAGCTCAGGATGATGTGCCAGACAGTGACAAGGCCAAGCTCTTCCTTCACAGAATTCCAAAGGATCTGCCAAGTGAAGAATTACATCAACTTATCCCAGGAGAATTCACAATTGAAGTTCAGACTAGTAGAAAAGGTCGAGGTGACAAGTATTCTGCTCTTGCAATTTTTGGAAGTCCACAAGAGGCACTTGACGCATATGAAAATTTGCCAGGAGATGAAGATAAGGACTCCTCTGGGCGGTTGCAGAAACCTGTGTTCATCCAACTCAAGTCTGGTTCAGCAGATAAGCTATATGTCCGTAAAATGACACATGATAATCCTTCCTCCCTGGCTTCTGTGAAGCGGCCATATCCAACCGAGGTAGCTACAGGTGAGTCAAAAAAGTTAAAGACAGAAAAAACTCCTGAACTTTCCCAGGAGAATTCAAGTGTTGATTATGAAAAGGAGATTGCAAGATTGAAGGAATTGCTAAGCCAAAGAGATCAAGAGATTTCTAGCCTGCACAAGATCATAGCTGCTCTCACCAGGAAACAAGGGCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109347.p1 GENE.S_Transcript_109347~~S_Transcript_109347.p1 ORF type:complete len:488 (+),score=125.47,RNase_T|PF00929.20|3.3e+03,RNase_T|PF00929.20|1.3e-08 S_Transcript_109347:207-1670(+)
MDEKLASAGKDALVQIVKLAQKRGMEGDKGGWKEFLKVYDKKFGASMSDPARRNPEVLLAFLRTFKEEDDLKYFAKVLKCHSNRELVKQYVKSEDATSLEQRLVRLTLDHPQYPIEYSFPSHEEEWIVTKPGKKSKAATSNTLLAVDCEMVLCEDGTEALVKICVVDRNLQVKLHEFVNPDKAIADYRTHITGVSAQDLDGITCSLADIQKSLKKMLNGAILVGHSLSNDLKVLKVDHTKVIDTSYIFKYGEESTKRRPSLNDLCKSVLGFEHRKKGEPHNCLDDACAAMKLVVAKFEKGFDDAIPVAQDDVPDSDKAKLFLHRIPKDLPSEELHQLIPGEFTIEVQTSRKGRGDKYSALAIFGSPQEALDAYENLPGDEDKDSSGRLQKPVFIQLKSGSADKLYVRKMTHDNPSSLASVKRPYPTEVATGESKKLKTEKTPELSQENSSVDYEKEIARLKELLSQRDQEISSLHKIIAALTRKQGL*

Click here to download the sequence:
Link to NCBI Protein BLAST