Transcript Information: S_Transcript_109358.p1


Annotated TAIR IDAT5G67240.1
Annotated Gene Namesmall RNA degrading nuclease 3
Annotated Gene Symbol(s)SDN3
Annotation TypeHomolog
Chromosome Positionchr5:26824454-26828098 | Reverse length=782
E-Value9E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9209391599588
Replicate 25.2466389801407
Replicate 33.4861269426318
Condition 2: 8 Hour
Replicate 15.9815119182202
Replicate 26.0022032935852
Replicate 37.7984808310907
Condition 3: 24 Hour
Replicate 12.1312081454238
Replicate 24.9749830289543
Replicate 33.5372379348638


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109358.p1 GENE.S_Transcript_109358~~S_Transcript_109358.p1 ORF type:complete len:164 (+),score=33.59 S_Transcript_109358:207-698(+)
ATGGATGAGAAGCTCGCCTCCGCAGGGAAAGACGCCCTTGTTCAAATTGTCAAGTTGGCACAGAAGCGGGGGATGGAGGGTGATAAAGGAGGATGGAAAGAATTTCTAAAAGTTTACGATAAAAAGTTTGGTGCTAGCATGAGTGACCCAGCTAGGAGGAACCCTGAAGTATTGCTTGCTTTTCTACGTACATTCAAGGAAGAGGATGATTTAAAATATTTTGCAAAAGTTCTGAAGTGCCACTCAAATCGTGAGCTGGTGAAGCAATATGTGAAGTCTGAAGATGCTACATCTCTTGAACAGAGGTTGGTCCGTTTGACCCTTGACCACCCACAATATCCAATTGAGTATTCATTTCCATCACACGAGGAGGTGTGTTTGAATCATTCTATTCTTGTTTTGCTATCACATATATTGATGACTAGAGATTGGAGATGGATTTTTTTATGGTTGTTATTGCATGAATCATCCCTCCATTCCATCCTTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109358.p1 GENE.S_Transcript_109358~~S_Transcript_109358.p1 ORF type:complete len:164 (+),score=33.59 S_Transcript_109358:207-698(+)
MDEKLASAGKDALVQIVKLAQKRGMEGDKGGWKEFLKVYDKKFGASMSDPARRNPEVLLAFLRTFKEEDDLKYFAKVLKCHSNRELVKQYVKSEDATSLEQRLVRLTLDHPQYPIEYSFPSHEEVCLNHSILVLLSHILMTRDWRWIFLWLLLHESSLHSILQ*

Click here to download the sequence:
Link to NCBI Protein BLAST