Transcript Information: S_Transcript_109394.p1


Annotated TAIR IDAT1G60800.1
Annotated Gene NameNSP-interacting kinase 3
Annotated Gene Symbol(s)NIK3
Annotation TypeOrtholog
Chromosome Positionchr1:22383601-22386931 | Reverse length=632
E-Value3.4e-308
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.021147589778
Replicate 221.203200353975
Replicate 318.408519504596
Condition 2: 8 Hour
Replicate 117.566740817824
Replicate 216.228929161657
Replicate 317.796162193398
Condition 3: 24 Hour
Replicate 116.900401513131
Replicate 219.047693217227
Replicate 318.904834767471


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109394.p1 GENE.S_Transcript_109394~~S_Transcript_109394.p1 ORF type:3prime_partial len:539 (+),score=102.39,Pkinase|PF00069.21|3.2e-42,Pkinase_Tyr|PF07714.13|5.2e-39,LRRNT_2|PF08263.8|1.4e-11,LRR_8|PF13855.2|0.0016,LRR_8|PF13855.2|2.4e-06 S_Transcript_109394:2982-4595(+)
ATGGAGAGAATGGTTTGCCTAACAGGATTGGTGTTCTTCATTTTGGTGGGGGCTGTTTCTGCTACACTCTCACCTACTGGAGTCAATTATGAAGTTGTTGCCTTGATGGGCATAAAAAATGAGCTGAAGGATCCATATAATGTTCTTGAGAATTGGGACATCAACTCTGTAGATCCTTGTAGCTGGAGGATGATTACTTGCTCTTCAGATGGCTATGTTTCTGCTCTGGGACTGCCTAGTCAAAGTTTATCTGGGAAATTATCTCCTGCAATTCAGAACCTCACCAAGTTGGAATCAGTCTTGTTGCAAAACAATGCCATATCTGGTCCTATTCCTGCTGAGATTGGGAGGTTGGAAATGCTTCAGACTTTGGATCTTTCAAACAATGAATTCAGTGGAGAAATTCCCAGTTCTTTAGGAGATTTGAAGAACCTAAACTATCTGCGACTCAATAACAATAGCCTTACTGGACGTTGCCCAGATACCCTCTCAAAAATTGAAGGTTTAACTCTTGTGGACCTTTCATTCAACAATTTAAGTGGTTCCTTGCCGAAGATATCTGCCAGAACCTTCAAGATAATTGGTAACCCTTTGATTTGTGGAACAAGTTCTGCTACCAACTGTTCTGTGGCATCACCTGAGCCACTTTCCTTCCCCCCAGATTCTCTTAGAGCTGAACCCAATTCTGGAGGAAGAGGACACCATTTTGCTATAGCTTTTGGAGCAAGCTTTGGTGCTGCTCTTTTATCCCTGATTATCATTGGTTTGGGTGTTTGGTGGTGTTATGGGCGCAACCGACAGATTTTCTTTGATGTGAATGAGCAATATGACCCGGAGGTATGCCTTGGCCATCTGAAGAGATATAGTTTCAAAGAGCTGCGCTCTGCAACAGACCATTTTAACTCAAAGAATATACTTGGAAGAGGTGGATTTGGTATAGTATACAAAGGTTCCCTAAATGATGGGACGTTGGTAGCAGTTAAACGGTTGAAGGATTATACTATAACTGCAGGAGAAATTCAGTTTCAGACAGAAGTTGAGACTATCAGTTTGGCTGTCCATCGGAATCTTCTCCGGCTATGTGGTTTCTGTTCTACAGAGAACGAACGACTCCTTGTCTATCCGTATATGGCCAACGGAAGTGTGGCATCTCGCCTCAAAGATCACATTCATGGAAGACCGGTTTTAGACTGGTCAAGGCGTAGGAATATTGCTCTAGGCACAGCAAGGGGACTTCTGTATTTACATGAACAGTGCGACCCTAAAATTATTCACCGTGATGTGAAGGCAGCTAACATTCTGCTTGACGAGGATTTCGAGGCAGTTGTTGGGGACTTTGGGCTAGCTAAGCTGTTGGATCACCGGGATTCCCATGTAACAACAGCCGTGCGTGGCACTGTTGGGCACATTGCCCCTGAGTATCTATCAACAGGCCAATCATCAGAGAAAACTGATGTTTTTGGGTTCGGAATATTGCTCTTGGAGCTGATCACGGGCCAAAAGGCCTTGGATTTTGGTCGAGGATCTAACCAAAAAGGCGTCATGCTTGATTGGGTTAAGAAGTTGCATAGTGAGGGGAAGCTTAATCAATTGGTAGATAAAGACTTGAAGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109394.p1 GENE.S_Transcript_109394~~S_Transcript_109394.p1 ORF type:3prime_partial len:539 (+),score=102.39,Pkinase|PF00069.21|3.2e-42,Pkinase_Tyr|PF07714.13|5.2e-39,LRRNT_2|PF08263.8|1.4e-11,LRR_8|PF13855.2|0.0016,LRR_8|PF13855.2|2.4e-06 S_Transcript_109394:2982-4595(+)
MERMVCLTGLVFFILVGAVSATLSPTGVNYEVVALMGIKNELKDPYNVLENWDINSVDPCSWRMITCSSDGYVSALGLPSQSLSGKLSPAIQNLTKLESVLLQNNAISGPIPAEIGRLEMLQTLDLSNNEFSGEIPSSLGDLKNLNYLRLNNNSLTGRCPDTLSKIEGLTLVDLSFNNLSGSLPKISARTFKIIGNPLICGTSSATNCSVASPEPLSFPPDSLRAEPNSGGRGHHFAIAFGASFGAALLSLIIIGLGVWWCYGRNRQIFFDVNEQYDPEVCLGHLKRYSFKELRSATDHFNSKNILGRGGFGIVYKGSLNDGTLVAVKRLKDYTITAGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMANGSVASRLKDHIHGRPVLDWSRRRNIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRGSNQKGVMLDWVKKLHSEGKLNQLVDKDLKN

Click here to download the sequence:
Link to NCBI Protein BLAST