Transcript Information: S_Transcript_109590.p1


Annotated TAIR IDAT3G11130.1
Annotated Gene NameClathrin, heavy chain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3482575-3491667 | Reverse length=1705
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7879819276352
Replicate 24.6299649618872
Replicate 34.173173858333
Condition 2: 8 Hour
Replicate 17.5884144376659
Replicate 26.6135756927659
Replicate 312.330517683903
Condition 3: 24 Hour
Replicate 14.1058813860058
Replicate 24.1357320394794
Replicate 34.2803834483135


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109590.p1 GENE.S_Transcript_109590~~S_Transcript_109590.p1 ORF type:3prime_partial len:548 (-),score=128.43,Clathrin|PF00637.16|1.2e+03,Clathrin|PF00637.16|2.9e-22,Clathrin|PF00637.16|1.8e-21,Clathrin|PF00637.16|6.7e-29,Clathrin|PF00637.16|2e+02 S_Transcript_109590:1-1395(-)
ATGGAAGGAGGCTGTCCAATTGATTATAACACAATAACTGATCTCTTTCTTCAGAGGAATTTGATTCGTGAGGCAACAGCATTTCTCTTAGATGTTTTGAAGCCAAATTTGCCTGAACATGGCTATTTGCAAACAAAGGTTTTGGAAGTCAATCTTGTTACCTTTCCCAATGTGGCAGATGCCATTTTAGCAAATGGAATGTTCAGTCACTATGATCGTTCTAGAGTCGCTCAACTTTGTGAGAAAGCTGGTCTTTACATACAAGCTCTTCGGCATTACACTGACTTACCAGATATAAAACGTGTCATTGTGAACACTCATGCAATAGAACCACAGGCTCTTGTTGAGTTCTTTGGTACTCTTTCACGGGAATGGGCATTGGAGTGCATGAAGGATCTTTTGCTTGTTAATCTCAGAGGCAACCTTCAGATAATTGTTCAGACGGCCAAGGAGTACTGTGAGCAGCTGGGTGTTGATGCATGTATTAAACTCTTTGAGCAATTCAAATCATATGAAGGGTTGTACTTCTTCCTTGGATCATATTTGAGCTCCAGTGAGGATCCTGACATTCACTTCAAATACATTGAAGCAGCTGCTAAAACGGGGCAGCTGAAAGAAGTGGAACGAGTGACCCGAGAATCCAATTTCTATGATGCTGAAAAGACAAAACATTTTTTGATGGAAGCCAAGCTTCCTGATGCACGTCCTCTTATCAATGTCTGTGATCGATTTGGTTTTGTTCCAGATCTCACACACTACCTATATACAAACAACATGCTTCGCTATATTGAAGGTTATGTTCAGAAGGTTAATCCGGGGAATGCACCACTAGTTGTTGGGCAGCTTCTTGATGATGAATGTCCCGAAGATTTCATTAAGGGACTGATACTATCTGTGCGCTCTTTGCTTCCAGTTGAGCCTCTTGTGGAGGAGTGTGAGAAAAGAAATCGGCTTCGTCTGCTGACTCAATTCCTTGAGCACCTGGTGAGTGAGGGAAGCCAAGATGTGCATGTGCACAATGCTCTTGGTAAAATTATTATTGAGAGTGGCAACAATCCAGAGCACTTCCTCACAACCAACCCATACTATGATTCACGTGTGGTGGGTAAGTATTGTGAAAAACGTGACCCTACTCTTGCCGTGGTTGCTTACAGGAGAGGACAATGTGATGATGAGCTTGTCAATGTGACGAATAAGAATTCTCTGTTCAAGCTGCAAGCTAGGTATGTTGTTGAGAGAATGGATGGTGATCTTTGGGAGAAAGTTCTCAATCCTGAAAATGAGTACAGGAGGCAGCTCATTGATCAAGTTGTGTCCACTGCTTTGCCTGAGAGCAAGAGTCCTGAACAAGTTTCCGCAGCAGTTAAAGCTTTTATGACAGCTGATCTCCCTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109590.p1 GENE.S_Transcript_109590~~S_Transcript_109590.p1 ORF type:3prime_partial len:548 (-),score=128.43,Clathrin|PF00637.16|1.2e+03,Clathrin|PF00637.16|2.9e-22,Clathrin|PF00637.16|1.8e-21,Clathrin|PF00637.16|6.7e-29,Clathrin|PF00637.16|2e+02 S_Transcript_109590:1-1395(-)
MEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLEVNLVTFPNVADAILANGMFSHYDRSRVAQLCEKAGLYIQALRHYTDLPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQLKEVERVTRESNFYDAEKTKHFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIESGNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYVVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPH

Click here to download the sequence:
Link to NCBI Protein BLAST