Transcript Information: S_Transcript_109734.p1


Annotated TAIR IDAT3G57080.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)RPB5B, NRPE5
Annotation TypeOrtholog
Chromosome Positionchr3:21125878-21127470 | Forward length=222
E-Value7E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.335523915032
Replicate 231.51827079645
Replicate 327.41710319571
Condition 2: 8 Hour
Replicate 137.605040961016
Replicate 236.653877012409
Replicate 337.017253206865
Condition 3: 24 Hour
Replicate 129.451583991783
Replicate 229.139186312447
Replicate 331.640153918918


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109734.p1 GENE.S_Transcript_109734~~S_Transcript_109734.p1 ORF type:complete len:224 (+),score=31.41,RNA_pol_Rpb5_C|PF01191.15|8.4e-28,RNA_pol_Rpb5_N|PF03871.10|1.5e-21,RNA_pol_Rpb5_N|PF03871.10|7e+03 S_Transcript_109734:78-749(+)
ATGGAGATGGAGGGAGAAGTGAACGGAGAACTAGGAAGATGCCTAAGCAGCTTTGTCGACGACGGCACTGTCGAAAGCCACCGTTACTTTCTGGCTCGAAGAACAGTTCTTGAGATGCTAAAGGACAGAGGTTTTGCGGTCCCTATTTCCGAGATTGAACTTTCTCTTCACGAGTTTCGTGACATTTACGGGCCTAAACCCGACCCGGATCGCCTTCGGGTCTCTACTGCCCTCCGTTCTGACCCTTCCAAAAAGATATTGGTGATATTCTGTGGGCCTCAGCTGGTGAAAGTGTCAGTAATGCGTGGCATTGCAGCTCAGATTGTTAATAAAGAGAGTTTGAGTGGGTTGATAATTATCCTGCAAAATAAGATTACTAACCAAGCTCAGAAAGCTGTGGATGTTTTGCCTTTCAAAGTTGAAATCTTTCAGATTACTGATTTGCTCGTGAATGTTACTAAGCATGTTCTGAAACCAAAGCATATTGTGCTGACCGACAGGGAGAAACAGAAGCTGTTACAGAAATACAATTTGGAAGAAAAACAGCTCCCTCGTATGTCAGTGAAGGATGCAATTTCGAGATATTATGGACTTGAGAAGGGCCAGGTGGTGAAAGTTATGTATAGTGGGGAGATTACCCAGTCACATATCACTTACCGTTGTGTATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109734.p1 GENE.S_Transcript_109734~~S_Transcript_109734.p1 ORF type:complete len:224 (+),score=31.41,RNA_pol_Rpb5_C|PF01191.15|8.4e-28,RNA_pol_Rpb5_N|PF03871.10|1.5e-21,RNA_pol_Rpb5_N|PF03871.10|7e+03 S_Transcript_109734:78-749(+)
MEMEGEVNGELGRCLSSFVDDGTVESHRYFLARRTVLEMLKDRGFAVPISEIELSLHEFRDIYGPKPDPDRLRVSTALRSDPSKKILVIFCGPQLVKVSVMRGIAAQIVNKESLSGLIIILQNKITNQAQKAVDVLPFKVEIFQITDLLVNVTKHVLKPKHIVLTDREKQKLLQKYNLEEKQLPRMSVKDAISRYYGLEKGQVVKVMYSGEITQSHITYRCVW*

Click here to download the sequence:
Link to NCBI Protein BLAST