Transcript Information: S_Transcript_10977.p1


Annotated TAIR IDAT1G05780.1
Annotated Gene NameVacuolar ATPase assembly integral membrane protein VMA21-like domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1726761-1728180 | Forward length=106
E-Value8.9E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.368660721825
Replicate 29.4248809760257
Replicate 38.7737288164702
Condition 2: 8 Hour
Replicate 110.559173846347
Replicate 210.425715870941
Replicate 312.416998604843
Condition 3: 24 Hour
Replicate 14.8779836920744
Replicate 27.9213322014418
Replicate 310.774465571118


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10977.p1 GENE.S_Transcript_10977~~S_Transcript_10977.p1 ORF type:complete len:103 (+),score=24.04,VMA21|PF09446.6|3.1e-18 S_Transcript_10977:194-502(+)
ATGGCAACAATGGCTGAAGTGAGCAGAAAGTTCTTTGTGGCCTCAATGTTTCTGTGGATACTTCCTATGGCAATCTTATATGGGTTTCAGCATGACTGGTTTCCTGGTTTCTCGCACATATCACCTTACTCTCAGACACTGTTGAGTGGATTCCTTGCTGTTATATCAGTTAATATAATGTTAGCATTCTACATCTGCATGGCAATGAGAGAGCCTTCTGAAAAACACCAGCCAGATCCTGCATTTGTTGCCAAGGCTAAGGCAAGCATAAAGCAGTCTAAACCTGGTGCTGCTGATAAAAAGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10977.p1 GENE.S_Transcript_10977~~S_Transcript_10977.p1 ORF type:complete len:103 (+),score=24.04,VMA21|PF09446.6|3.1e-18 S_Transcript_10977:194-502(+)
MATMAEVSRKFFVASMFLWILPMAILYGFQHDWFPGFSHISPYSQTLLSGFLAVISVNIMLAFYICMAMREPSEKHQPDPAFVAKAKASIKQSKPGAADKKD*

Click here to download the sequence:
Link to NCBI Protein BLAST