Transcript Information: S_Transcript_10979.p1


Annotated TAIR IDAT2G31710.1
Annotated Gene NameVacuolar ATPase assembly integral membrane protein VMA21-like domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13482057-13482895 | Reverse length=105
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.603714638623
Replicate 28.5284732743335
Replicate 37.1291248726523
Condition 2: 8 Hour
Replicate 15.0177388981489
Replicate 23.1959783771038
Replicate 33.9407449353747
Condition 3: 24 Hour
Replicate 13.8549794395166
Replicate 24.9517571511347
Replicate 36.1465486365409


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10979.p1 GENE.S_Transcript_10979~~S_Transcript_10979.p1 ORF type:5prime_partial len:119 (+),score=21.79,VMA21|PF09446.6|1.1e-08 S_Transcript_10979:1-357(+)
GTCAGCAAAGCACGCACTGAAGCAGACAAGCAGTCAAACACTAAGAGCAGCCGTTCTTCTCTTCTCTTCATCGCCGGTTCGAGTCACCTGTCACCGATGCCAACGAGCAGGCCGGTTCTTCAGCCGGCAACCACCCAGCCCCCACCAACACCAAGTTTCTCGCACATATCACCTTACTCTCAGACACTGTTGAGTGGATTCCTTGCTGTTATATCAGTTAATATAATGTTAGCATTCTACATCTGCATGGCAATGAGAGAGCCTTCTGAAAAACACCAGCCAGATCCTGCATTTGTTGCCAAGGCTAAGGCAAGCATAAAGCAGTCTAAACCTGGTGCTGCTGATAAAAAGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10979.p1 GENE.S_Transcript_10979~~S_Transcript_10979.p1 ORF type:5prime_partial len:119 (+),score=21.79,VMA21|PF09446.6|1.1e-08 S_Transcript_10979:1-357(+)
VSKARTEADKQSNTKSSRSSLLFIAGSSHLSPMPTSRPVLQPATTQPPPTPSFSHISPYSQTLLSGFLAVISVNIMLAFYICMAMREPSEKHQPDPAFVAKAKASIKQSKPGAADKKD*

Click here to download the sequence:
Link to NCBI Protein BLAST