Transcript Information: S_Transcript_109791.p1


Annotated TAIR IDAT5G64400.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 127 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 16; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25748922-25749947 | Forward length=162
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28927175255631
Replicate 20.35971939495948
Replicate 30.30069678397175
Condition 2: 8 Hour
Replicate 10.1158988604192
Replicate 20
Replicate 30.11584699785316
Condition 3: 24 Hour
Replicate 10.35616657865099
Replicate 20.73903733401133
Replicate 30.13707632828867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109791.p1 GENE.S_Transcript_109791~~S_Transcript_109791.p1 ORF type:complete len:184 (-),score=38.71 S_Transcript_109791:89-640(-)
ATGAAGCATTTGTCTTATGCTTCACCTCAAGCCAAACATTCTGATGGAAACATAACAAGTACTATCAAGACATCCAGACAGTTTATTTTCCACCTCGTTCCAATGTCAGCCAACCTAAAGAACTGCAATGCCAAAATAAACCAGTCAACCCACCCCAAATATCAGCTTTTGACTACAGAAAAGAAACCACTTACATCTTGGAAGGCTTTGTTGTGGATTCCACATGCATCCCCAACGCTGCTAGAGACAGGGGTTGGTGCAGCACTAGCAGCCTCAGTGACAACAGTCTCATGTTGGATTGTACGTGGACCCATGACAGCATCCACAGCCCTGTGTGCCACAGCACTTCCGGTTCCAAAAGCCATACCTTGTGCTATAGTGGAACCAATACCTCCAAGCATGGAGCCACCACTGGAAGCTGGAACAGGTGCTGGAGGAGGAGCATGGCTAACTGGCTGTGGAGGTGGGTTACGAGCAGCAGGACGGGGAGCTGCACGGGGAGCAGATCTTCCTCCAGAGCTGCGGCGAGGCATGGCGGCTTTGAGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109791.p1 GENE.S_Transcript_109791~~S_Transcript_109791.p1 ORF type:complete len:184 (-),score=38.71 S_Transcript_109791:89-640(-)
MKHLSYASPQAKHSDGNITSTIKTSRQFIFHLVPMSANLKNCNAKINQSTHPKYQLLTTEKKPLTSWKALLWIPHASPTLLETGVGAALAASVTTVSCWIVRGPMTASTALCATALPVPKAIPCAIVEPIPPSMEPPLEAGTGAGGGAWLTGCGGGLRAAGRGAARGADLPPELRRGMAALRN*

Click here to download the sequence:
Link to NCBI Protein BLAST