Transcript Information: S_Transcript_109793.p3


Annotated TAIR IDAT5G64400.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 127 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 16; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25748922-25749947 | Forward length=162
E-Value2.9E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.50154935541133
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109793.p3 GENE.S_Transcript_109793~~S_Transcript_109793.p3 ORF type:complete len:85 (-),score=20.27 S_Transcript_109793:1408-1626(-)
ATGACAGCATCCACAGCCCTGTGTGCCACAGCACTTCCGGTTCCAAAAGCCATACCTTGTGCTATAGTGGAACCAATACCTCCAAGCATGGAGCCACCACTGGAAGCTGGAACAGGTGCTGGAGGAGGAGCATGGCTAACTGGCTGTGGAGGTGGGTTACGAGCAGCAGGACGGGGAGCTGCACGGGGAGCAGATCTTCCTGGAACATCAAAGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109793.p3 GENE.S_Transcript_109793~~S_Transcript_109793.p3 ORF type:complete len:85 (-),score=20.27 S_Transcript_109793:1408-1626(-)
MTASTALCATALPVPKAIPCAIVEPIPPSMEPPLEAGTGAGGGAWLTGCGGGLRAAGRGAARGADLPGTSKE*

Click here to download the sequence:
Link to NCBI Protein BLAST