Transcript Information: S_Transcript_109901.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value1.4E-257
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.123503635507
Replicate 218.916443916269
Replicate 318.186141494611
Condition 2: 8 Hour
Replicate 14.8213925934388
Replicate 23.5016806566529
Replicate 31.7794098870245
Condition 3: 24 Hour
Replicate 16.1545584790891
Replicate 25.2816534804009
Replicate 33.1143741787187


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109901.p1 GENE.S_Transcript_109901~~S_Transcript_109901.p1 ORF type:complete len:575 (+),score=59.45,AMP-binding|PF00501.24|1.7e-89,AMP-binding_C|PF13193.2|3.2e-23 S_Transcript_109901:193-1917(+)
ATGGATCTTCTCACACAATTCCCACCAAACTCATCCTCTCTTACACCAATAAGTTTCATAGAAAGAGCTGCCACAATCTATGGTGATTGTCCCTCCATTGTCTACAACAACAACTCCTACACCTGGGAGGAGACTCATCGACGATGCCTTCAGGCGGCATCGTCGATCTCCTCCCTAGGTATAAAGCGGGGCCAAGTGGTGTCAGTCTTGGCCCCGAATGTCCCCGCCATGAACGAGCTCCATTTTTCGGTTCCTATGGCGGGGGCAGTCCTTAATAACCTCAACACTCGCCTTGATCCTCGCACTCTTTCGGTGCTCCTTCGGCACAGCGAATCAAAACTCATCTTTGTTGATCAGCTTCTCCACCCTCTTCTTGTTCAAGCTCTTTCTCTTTTTCCACCAAACACTCCTCGTCCTCTTGTTATCCTCATCAAGGATGATGCTGTTCTACATGAACATGGTGGTAATGGATCAATCCCAGCCGTTGATTTCGTTGGAGATTACGATCAGTTAGTTGACGGTGGAGATTCAAGCTTCAAGTGGGTCCGTCCAAAGAGCGAGTGGGACCCAATTGCCTTGAACTACACCTCCGGAACCACCAACTCACCAAAAGGGGTGGTCCACAGCCATAGAGGATACTTCATACTTACACTTGATAAACTCCTCAACTGGTCAGTTCCAAAGCAGCCTGTGTATCTTTGGACCCTACCGATGTTCCACGCCAATGGTTGGAGTTTGGCGTGGGGGATGGCTGCAGTGGGGGCTACGAATGTTTGTCTAAGACGATTCGATGCCCCCACTATTTATGCGGCTATCCAGGAGCACCAGGTCACCCACATGTCTGGTGCTCCCGTGGTGCTCAACATGCTAGCCAACATGCCCAAAGCCAAGCCCTTAAAAAAGCCGGTTCAAGTCCTCACGGCCGGGGCCCCACCCCCGGCCTCGGTCCTCCACCGGATCGAGTCCCTGGGGTTCATGGTCACTCACGGGTACGGACTGACCGAGACGAGTGGGATTGTTGTGCATTGCACTTGGAAGTCCAAGTGGGACCGCCTCCCCGCTCAGGATCGGGCGAGGCTAAAAGCAAGGCAGGGCGTTGGGTCCTTGGGGATGACAGAGGTGGATGTTTTAGACCCCAAAACAGGTCAGCCCGTCAAACGAGACGGGCTGACCCCAGGAGAGGTGGTCCTAAAAGGAGGGAGCCTCATGTTGGGTTACTTAAAAGACCCCGAAGCGACCTCCAAGGCCATGACCCCGGCCGGTTGGTTCCGAACTGGGGACATGGGGGTCATACATAGTGATGGGTACTTGGAAATCAAAGACAGGCTGAAGGATATAATAATAAGTGGGGGAGAGAATATAAGTAGTGTGGAGGTGGAATCGGTGTTATACAGCCACCCTGCCATCAACGAGGTGGCGGTGGTGGCTCGGCCCCACGAGTATTGGGGAGAGTCTCCTTGTGCCTTTATTAGCCTCAAGAAGGATTGCAATGGTGGTAATATTACTGAGAAGGAGATAATAGAGTTTTGTAGAGACAGAATAGCTCACTTCATGGCTCCTAAGGCAGTTGTTTTCCAAGATGAGCTCCCAAAGACTTCAACTGGTAAAATTCAGAAGTTTCTTTTGAGGGAAATTGCCAAATCCATGGGGCCTCTCAAGGAAAAGGGAAAAATCTCAAGAGCAAATGCAGACAAAGGATGGCCTGTCGCACACACTCAAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109901.p1 GENE.S_Transcript_109901~~S_Transcript_109901.p1 ORF type:complete len:575 (+),score=59.45,AMP-binding|PF00501.24|1.7e-89,AMP-binding_C|PF13193.2|3.2e-23 S_Transcript_109901:193-1917(+)
MDLLTQFPPNSSSLTPISFIERAATIYGDCPSIVYNNNSYTWEETHRRCLQAASSISSLGIKRGQVVSVLAPNVPAMNELHFSVPMAGAVLNNLNTRLDPRTLSVLLRHSESKLIFVDQLLHPLLVQALSLFPPNTPRPLVILIKDDAVLHEHGGNGSIPAVDFVGDYDQLVDGGDSSFKWVRPKSEWDPIALNYTSGTTNSPKGVVHSHRGYFILTLDKLLNWSVPKQPVYLWTLPMFHANGWSLAWGMAAVGATNVCLRRFDAPTIYAAIQEHQVTHMSGAPVVLNMLANMPKAKPLKKPVQVLTAGAPPPASVLHRIESLGFMVTHGYGLTETSGIVVHCTWKSKWDRLPAQDRARLKARQGVGSLGMTEVDVLDPKTGQPVKRDGLTPGEVVLKGGSLMLGYLKDPEATSKAMTPAGWFRTGDMGVIHSDGYLEIKDRLKDIIISGGENISSVEVESVLYSHPAINEVAVVARPHEYWGESPCAFISLKKDCNGGNITEKEIIEFCRDRIAHFMAPKAVVFQDELPKTSTGKIQKFLLREIAKSMGPLKEKGKISRANADKGWPVAHTQK*

Click here to download the sequence:
Link to NCBI Protein BLAST