Transcript Information: S_Transcript_109991.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4006842755358
Replicate 20.74648536096855
Replicate 32.0106742346783
Condition 2: 8 Hour
Replicate 11.6034128057995
Replicate 21.9344079650891
Replicate 32.163638666671
Condition 3: 24 Hour
Replicate 12.2994614200625
Replicate 21.7892482823432
Replicate 32.0860337477916


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109991.p1 GENE.S_Transcript_109991~~S_Transcript_109991.p1 ORF type:complete len:266 (+),score=37.13,gag_pre-integrs|PF13976.2|2.2e-14,rve|PF00665.22|1.5e-13 S_Transcript_109991:2193-2990(+)
ATGACAAATAATTCAAGCATCTTTTCCAAGCTCGACACCTCTATCAACATTCCAGTTCGGATGGGCAACGGGGCTGTTGTACAGTCAACTGGCAGAGGCACTATCGCAGTCCAAACAAAGAAAGGTACTATGTACATCAATGATGTTTTTCTTGTTCCAGATCTTGATGAAAATCTGCTAAGTGTACCGCAAATGATTAAAAATGGTTACTCGCTAGTTTTTGAGGATAACCATTGCACTATATTTGATTCGGAAAAGAAAGAAATCGTCAAAGTTGCCATGGAAAATAAGAGCTTCCCTCTAAAGTGGGAATATCCTAAGGAGACAGCAGGCAAAGTTATCATTGATGACACTTGGTTATGGCATAGAAGGTATGGACACTTTAATGTGCGTGCCCTTAATGACCTTCACAACAAAGGGATGGTGAGAGACTTTCCTAACATTCTTCTGTCCAAGGACCTATGTGAAGCATGCCAACTTGGGAAGCAACATAGGAAGCCGTTCCCTAAGGAGAAAGTTTGGCGAGCCACCGAGAAGTTAGAGCTTGTTCACACTGATGTTTGTGGGCCACATCCGACAATATCTCTTAGTGGGAATCGTTATTTTATCCTCTTCATTAATGATTTCACTCGCATGACGTGGGTGTACTTCATGAAGGAAAGGTCCCAAGTGTCCATTATCTTCAAAAGGTTCAAGTCCTTTGTAGAAACTCAAAGTGGGTGCAAATTGAAGAAAATCAGGGCTGATAGGGGTAAAGAATATACCTCATCAGAATTTGATAAATTTTGTGAAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109991.p1 GENE.S_Transcript_109991~~S_Transcript_109991.p1 ORF type:complete len:266 (+),score=37.13,gag_pre-integrs|PF13976.2|2.2e-14,rve|PF00665.22|1.5e-13 S_Transcript_109991:2193-2990(+)
MTNNSSIFSKLDTSINIPVRMGNGAVVQSTGRGTIAVQTKKGTMYINDVFLVPDLDENLLSVPQMIKNGYSLVFEDNHCTIFDSEKKEIVKVAMENKSFPLKWEYPKETAGKVIIDDTWLWHRRYGHFNVRALNDLHNKGMVRDFPNILLSKDLCEACQLGKQHRKPFPKEKVWRATEKLELVHTDVCGPHPTISLSGNRYFILFINDFTRMTWVYFMKERSQVSIIFKRFKSFVETQSGCKLKKIRADRGKEYTSSEFDKFCEE*

Click here to download the sequence:
Link to NCBI Protein BLAST