Transcript Information: S_Transcript_109991.p3


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98566671241409
Replicate 21.3619005899701
Replicate 31.7076607484815
Condition 2: 8 Hour
Replicate 12.7644024485172
Replicate 21.6571739733131
Replicate 31.8421102868502
Condition 3: 24 Hour
Replicate 10.94391471872938
Replicate 20.83940042875361
Replicate 31.0898414249124


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109991.p3 GENE.S_Transcript_109991~~S_Transcript_109991.p3 ORF type:complete len:162 (+),score=41.79,UBN2|PF14223.2|4.5e+02,UBN2|PF14223.2|2.7e-30,UBN2_2|PF14227.2|1.6e+02,UBN2_2|PF14227.2|2.8e-10 S_Transcript_109991:1262-1747(+)
ATGAAGCTCTTCTTGAGAGCAAATGCACTATGGGAAGTTGTAGAGAAGGGTATTGAGCAAAGAAAGGAGGGAGAACAATACACAAAAGCCCAAGAAAAAAAACTCACTGAACATGAGTTAAAAGATGCCAAAGCCTTGTCTTACATTTTGGGTGCTGTCACAGAGACCATTTTTCCCAGAATAATGAGAGCATCTTCTGCCAAGGAAGCATTGAATATTCTCCGAGAAGAATTCCAAGGAGATGAGAAAGTGAGAGCCATTCGGCTCAACACTTTAAGAAAGGATTTTGATAATATGAAGATGAAGGATGATGAAAATCTTAGGGGTTACACTTCTAAATTGCTAGAAGTTGTAAACCAAATGAAGATATGCGGGGAGGATATCCCGGATGTAAGAGTTGTTAACAAGATTTTGGGAAGCTTGGTGAAAAGGTTCAACACTATTGTCACTGTGATTGAAGAATCCAAGGACTTATCAAAACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109991.p3 GENE.S_Transcript_109991~~S_Transcript_109991.p3 ORF type:complete len:162 (+),score=41.79,UBN2|PF14223.2|4.5e+02,UBN2|PF14223.2|2.7e-30,UBN2_2|PF14227.2|1.6e+02,UBN2_2|PF14227.2|2.8e-10 S_Transcript_109991:1262-1747(+)
MKLFLRANALWEVVEKGIEQRKEGEQYTKAQEKKLTEHELKDAKALSYILGAVTETIFPRIMRASSAKEALNILREEFQGDEKVRAIRLNTLRKDFDNMKMKDDENLRGYTSKLLEVVNQMKICGEDIPDVRVVNKILGSLVKRFNTIVTVIEESKDLSKL*

Click here to download the sequence:
Link to NCBI Protein BLAST