Transcript Information: S_Transcript_109994.p2


Annotated TAIR IDAT1G43980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16687637-16689502 | Reverse length=621
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6529814431789
Replicate 20.82221575990738
Replicate 31.2600627137864
Condition 2: 8 Hour
Replicate 12.9140284905399
Replicate 21.9453781425849
Replicate 30.92677598282528
Condition 3: 24 Hour
Replicate 11.2211425553748
Replicate 20.9853831120151
Replicate 30.78329330450671


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_109994.p2 GENE.S_Transcript_109994~~S_Transcript_109994.p2 ORF type:complete len:161 (+),score=16.20,PPR_2|PF13041.2|5.2e+02,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|43,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.00019,PPR|PF01535.16|15 S_Transcript_109994:288-770(+)
ATGGCACAATGTCTGTTCCAGGAAATGCCTGAACGTGATGTTGTGAGTTGGAATTCTATGATCTCATGGCATGCTTCTGGTGGGCATTGTGATTATGTGTGGGGATTATTCAGGGATATGTTATACGTCGGAGTGAAACCAAGTGCGCACACTTATTCGATTCTTTTCTCTGAGGTGTCTGATTCTCTCCATGGCAAGCAACTTCATGGTAGCTTGCTAAGAAGTGGTTTATTCAGGTCAAATGTGGTGCTGGGAAATTCCTTAATCGATATGTATGGTAATCTTGGCAGTATAGACAAGTTAGTACAACAAGTGATCAAAGAAGAGCATGTAAACTCATCCGGTAAATATCCCAAGAACCTCATCAAAGAAAACTGGTATAATGCTAGTTCTCCGTGTCCAGTTCTACAACATCCCATAATCAATGAATTCCAAGATATTACATCCAGCTGTTCCATCATCAAAAACACACCGAATGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_109994.p2 GENE.S_Transcript_109994~~S_Transcript_109994.p2 ORF type:complete len:161 (+),score=16.20,PPR_2|PF13041.2|5.2e+02,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|43,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.00019,PPR|PF01535.16|15 S_Transcript_109994:288-770(+)
MAQCLFQEMPERDVVSWNSMISWHASGGHCDYVWGLFRDMLYVGVKPSAHTYSILFSEVSDSLHGKQLHGSLLRSGLFRSNVVLGNSLIDMYGNLGSIDKLVQQVIKEEHVNSSGKYPKNLIKENWYNASSPCPVLQHPIINEFQDITSSCSIIKNTPNA*

Click here to download the sequence:
Link to NCBI Protein BLAST