Transcript Information: S_Transcript_110132.p1


Annotated TAIR IDAT5G18650.1
Annotated Gene NameCHY-type/CTCHY-type/RING-type Zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6218260-6220374 | Forward length=267
E-Value5.7E-185
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 167.5255255221
Replicate 263.965624948466
Replicate 380.446113737795
Condition 2: 8 Hour
Replicate 174.718438461895
Replicate 280.805781653938
Replicate 367.049475861938
Condition 3: 24 Hour
Replicate 170.914360585138
Replicate 265.877273201398
Replicate 368.607725266155


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110132.p1 GENE.S_Transcript_110132~~S_Transcript_110132.p1 ORF type:complete len:268 (+),score=39.10,zinc_ribbon_6|PF14599.2|7.9e+03,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1e+04,zinc_ribbon_6|PF14599.2|3.3e-27,zf-CHY|PF05495.8|8.3e-22,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|17 S_Transcript_110132:1796-2599(+)
ATGGAGGGCTTTGCTAATGAACGCCTTGATTTTGGGAAGATGGGTTATGGTTGTCAGCATTACAGGAGAAGATGTTTGATCCGAGCTCCTTGTTGCAATGAGGTTTACTCCTGTCGCCATTGCCATAATGAGGCTGCAAGCATGTTGCGCAACCCAATGGATCGGCATGAGCTTAATAGATATGAGGTTGAACAAGTTATTTGTGCAGTTTGTGACACAGAACAACCAGCAGGACGTCTTTGTACAAATTGCGGTGTCAATATGGGAGAGTACTTCTGCGAGATATGCAAGTTCTATGATGATGATATTGATAAAAAGCAATTTCACTGTGATGATTGTGGGATTTGCAGGGTTGGTGGACGTGAGAATTTCTTCCACTGCAAAAAGTGTGGTTCTTGCTATTCTGTCGCTCTACGTGATAATCATATGTGTATAGAGAACTCCATGCACCATCACTGTCCCATATGTTATGAGTACCTTTTTGACTCTTTGAAAGACACCACTGTCTTGAGATGTGGGCACACAATGCATTGTGAATGCTACCATGAGATGATAAAGCGAGACAAATATTGCTGCCCAATATGCTCTAAATCGGTGATTGACATGTCTAGGACATGGAAGAGGCTAGATGAGGAGATTGAAGCTACCACTATGCCTGAAGATTATCGCTACAAGAAGGTTTGGATTTTATGTAACGACTGCAACGACACTACGGAGGTCTTCTTCCACATAATTGGCCAGAAGTGCAGCCACTGCAACTCTTATAATACCCGTCAAATTGCACCTCCTGTTCTTCCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110132.p1 GENE.S_Transcript_110132~~S_Transcript_110132.p1 ORF type:complete len:268 (+),score=39.10,zinc_ribbon_6|PF14599.2|7.9e+03,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1e+04,zinc_ribbon_6|PF14599.2|3.3e-27,zf-CHY|PF05495.8|8.3e-22,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|17 S_Transcript_110132:1796-2599(+)
MEGFANERLDFGKMGYGCQHYRRRCLIRAPCCNEVYSCRHCHNEAASMLRNPMDRHELNRYEVEQVICAVCDTEQPAGRLCTNCGVNMGEYFCEICKFYDDDIDKKQFHCDDCGICRVGGRENFFHCKKCGSCYSVALRDNHMCIENSMHHHCPICYEYLFDSLKDTTVLRCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSRTWKRLDEEIEATTMPEDYRYKKVWILCNDCNDTTEVFFHIIGQKCSHCNSYNTRQIAPPVLPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST