Transcript Information: S_Transcript_110143.p1


Annotated TAIR IDAT5G37930.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15102239-15103651 | Reverse length=349
E-Value5.7E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3886995717211
Replicate 29.4716860054112
Replicate 38.4390926038069
Condition 2: 8 Hour
Replicate 111.622063617563
Replicate 211.962325236666
Replicate 310.794915111006
Condition 3: 24 Hour
Replicate 111.175146053029
Replicate 25.8844343681519
Replicate 36.8080068445686


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110143.p1 GENE.S_Transcript_110143~~S_Transcript_110143.p1 ORF type:complete len:389 (+),score=44.69,Sina|PF03145.12|3.1e-15 S_Transcript_110143:148-1167(+)
ATGGCGAAATTCTCAATATTGAGAGATGAGGAAGAAGACGAAGCAGACGAGGAATTTTGCATACGTAGCCCTAAAAGGAGAAGAACCTCTCACTCTCAGCCCCTTCCCATTGCCAGTGCCCCACCTAATTATGAAGACCATCAACAACAGCAACAACAGCAACAACAACAACGTTCGGCAGAAGGTGATGATGATAATGATACCAGATTTTTCGAGGGACCCACCAATTCAGGCTCCATGTCCGTCATTTTGTCCGACCCGGATGTTTTGGACTGTTCTATTTGCTTTAATCCTTTGACCTCTCCTGTCTTTCAGTGTGACAATGGGCATATTGCGTGTTCTTCTTGTTGCACCAAGCTTGGTAACAAATGTCCTTCATGTTGTGGGAAGATTGGCTATAATCGATGCCGGGCTATTGAGAAGGTTATCGAATCTGTAAGAGTACCTTGCTGTTACTTGAGGTATGGCTGTAGAGAAACAGTTAGTTACTGTAAGAAAGATGAGCATGAGGAGATCTGCATCTATGCCCCTTGTTCATGTCCCTTTCCTGACTGCATCTTCCGTGGTTCATCTAGAAGCCTTTCTCAGCATGTGCGCATTGAACATGCAGATTTTGTGATTCGCTTCTGTTACGACTCCATCTTTCCTGTTTCTGTAGGGATGGATGAAAAATTTGTTGTTCTTCAAGAAGAGAGAGATGGGACTCTGTTTATCCTGAGCCATGGGAACACAGTGACAGTTAGGTGTATTGACCCGAGCCTGTCAAAGGGAAGGTTTGCATATGATATTGTACTCTGTAAAGGAGGTAGCTCTCTAAGATTTAGATCTTCCACTCATTGTACTACAGGACAGGTCAGGGATTCTCCTTCTATTGACTATTTTCTAGTTCCTGGTTACTTCTACCACACTGGAGGCCACCTCAAATTGGATATTTGCATATGGAGTATGCATCTATCTCCTAAAGACACCACTCAAACAGTTAATGATTTACAAACGGCTGACAATCAGTGGAGATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110143.p1 GENE.S_Transcript_110143~~S_Transcript_110143.p1 ORF type:complete len:389 (+),score=44.69,Sina|PF03145.12|3.1e-15 S_Transcript_110143:148-1167(+)
MAKFSILRDEEEDEADEEFCIRSPKRRRTSHSQPLPIASAPPNYEDHQQQQQQQQQQRSAEGDDDNDTRFFEGPTNSGSMSVILSDPDVLDCSICFNPLTSPVFQCDNGHIACSSCCTKLGNKCPSCCGKIGYNRCRAIEKVIESVRVPCCYLRYGCRETVSYCKKDEHEEICIYAPCSCPFPDCIFRGSSRSLSQHVRIEHADFVIRFCYDSIFPVSVGMDEKFVVLQEERDGTLFILSHGNTVTVRCIDPSLSKGRFAYDIVLCKGGSSLRFRSSTHCTTGQVRDSPSIDYFLVPGYFYHTGGHLKLDICIWSMHLSPKDTTQTVNDLQTADNQWRS*

Click here to download the sequence:
Link to NCBI Protein BLAST