Transcript Information: S_Transcript_110313.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22843777884275
Replicate 20.094690083937832
Replicate 30.47492024249615
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.77815662064712
Replicate 30.32474735285557


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110313.p1 GENE.S_Transcript_110313~~S_Transcript_110313.p1 ORF type:5prime_partial len:233 (+),score=22.07 S_Transcript_110313:3-701(+)
CGTGTCAACAAATGTCTTGGGTCGAGCCAGAGTCCCCTTGCCAAATTAACCCCTCGAAAAAAAAACTTGAGGGTTTATCGGATTCATAAACCGGATACGGCGCGAACCGGAAATTCGGTCGACAAAATGAAAGGAGCTTTTCTTCTCCGGCAACTCCTTAAACCTGCGACAACCGCCGACAAAGTCACAAGAACTCAACAATCTTGTTATGCTACTATCACCGCCATAAAGGAAGAGAATAACCAGTCAAAGAAAAACAACTTTAGTAACAACAACAAAGGCAAATGGGTGATTTTACCACCTTATACTTCAACTATCAACGCAGTTTCACTGGGAAAAAGAATAACTGGTCGGAGTACAACAAAAGAGGAAGCTAATAATGAATCAGTTGAGACTAATACAATCACAGCTCTCAAATGGGTCCTTCGTTGTTGCCCTCAACTCCCTCGTTCACTTGTCCAAAAGCTCTTTCGCCTTCGACAGGTGGGATCTAAGCACTTAATGAATGAAGGAGATAGAATATTTCTTCCTATAACTGTAAAAGGCTCATCCATCAAGAAGCAAGAGTATGAGTGCAGTCAAGAAGAAATGAACTTTATTCGTGGTCTCGAGTTGTATAAGGATGAGGCTGTTATTGCCATCAATAAACCACCGAAACTGCCAGTACAGGTTATTGGCAGGGCGGGCATGGAATCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110313.p1 GENE.S_Transcript_110313~~S_Transcript_110313.p1 ORF type:5prime_partial len:233 (+),score=22.07 S_Transcript_110313:3-701(+)
RVNKCLGSSQSPLAKLTPRKKNLRVYRIHKPDTARTGNSVDKMKGAFLLRQLLKPATTADKVTRTQQSCYATITAIKEENNQSKKNNFSNNNKGKWVILPPYTSTINAVSLGKRITGRSTTKEEANNESVETNTITALKWVLRCCPQLPRSLVQKLFRLRQVGSKHLMNEGDRIFLPITVKGSSIKKQEYECSQEEMNFIRGLELYKDEAVIAINKPPKLPVQVIGRAGMES*

Click here to download the sequence:
Link to NCBI Protein BLAST