Transcript Information: S_Transcript_110314.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value7E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.092086509464292
Replicate 20.38170916189472
Replicate 30
Condition 2: 8 Hour
Replicate 11.1806444466233
Replicate 20
Replicate 30.73757258148724
Condition 3: 24 Hour
Replicate 10
Replicate 20.15684298668752
Replicate 31.0472821206277


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110314.p1 GENE.S_Transcript_110314~~S_Transcript_110314.p1 ORF type:complete len:289 (+),score=28.35,PseudoU_synth_2|PF00849.18|1.1e+03,PseudoU_synth_2|PF00849.18|3.7e-10 S_Transcript_110314:129-869(+)
ATGAAAGGAGCTTTTCTTCTCCGGCAACTCCTTAAACCTGCGACAACCGCCGACAAAGTCACAAGAACTCAACAATCTTGTTATGCTACTATCACCGCCATAAAGGAAGAGAATAACCAGTCAAAGAAAAACAACTTTAGTAACAACAACAAAGGCAAATGGGTGATTTTACCACCTTATACTTCAACTATCAACGCAGTTTCACTGGGAAAAAGAATAACTGGTCGGAGTACAACAAAAGAGGAAGCTAATAATGAATCAGTTGAGACTAATACAATCACAGCTCTCAAATGGGTCCTTCGTTGTTGCCCTCAACTCCCTCGTTCACTTGTCCAAAAGCTCTTTCGCCTTCGACAGGTGGGATCTAAGCACTTAATGAATGAAGGAGATAGAATATTTCTTCCTATAACTGTAAAAGGCTCATCCATCAAGAAGCAAGAGTATGAGTGCAGTCAAGAAGAAATGAACTTTATTCGTGGTCTCGAGTTGTATAAGGATGAGGCTGTTATTGCCATCAATAAACCGCCGAAATTGCCAGTACAGGGCGGGCATGGAATCCTAAAGAGTTTAGATGAACTGGCTGCTACTTGTCTTAGATACGACTATGAGGATTCTCCTCGTCTGGTCCATAGACTTGACAGGGATAGTAGTGGAATATTGGTGATGGGAAGAACGCAAACAAGCACAGCTGTCCTTCATTCTGTTTTCCATGAAAAAAACTGTCAGTACATTGGACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110314.p1 GENE.S_Transcript_110314~~S_Transcript_110314.p1 ORF type:complete len:289 (+),score=28.35,PseudoU_synth_2|PF00849.18|1.1e+03,PseudoU_synth_2|PF00849.18|3.7e-10 S_Transcript_110314:129-869(+)
MKGAFLLRQLLKPATTADKVTRTQQSCYATITAIKEENNQSKKNNFSNNNKGKWVILPPYTSTINAVSLGKRITGRSTTKEEANNESVETNTITALKWVLRCCPQLPRSLVQKLFRLRQVGSKHLMNEGDRIFLPITVKGSSIKKQEYECSQEEMNFIRGLELYKDEAVIAINKPPKLPVQGGHGILKSLDELAATCLRYDYEDSPRLVHRLDRDSSGILVMGRTQTSTAVLHSVFHEKNCQYIGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST