Transcript Information: S_Transcript_110315.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2474844328991
Replicate 20.68946217367234
Replicate 30.28816775130626
Condition 2: 8 Hour
Replicate 10.5831161414841
Replicate 20.87390033748932
Replicate 30.66612023765567
Condition 3: 24 Hour
Replicate 11.0239789136216
Replicate 20.61971359779075
Replicate 30.59114166574491


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110315.p1 GENE.S_Transcript_110315~~S_Transcript_110315.p1 ORF type:5prime_partial len:256 (+),score=32.17 S_Transcript_110315:3-770(+)
CGTGTCAACAAATGTCTTGGGTCGAGCCAGAGTCCCCTTGCCAAATTAACCCCTCGAAAAAAAAACTTGAGGGTTTATCGGATTCATAAACCGGATACGGCGCGAACCGGAAATTCGGTCGACAAAATGAAAGGAGCTTTTCTTCTCCGGCAACTCCTTAAACCTGCGACAACCGCCGACAAAGTCACAAGAACTCAACAATCTTGTTATGGCAGTATCACCGCCACTGAAGAAGAGAGTAACCGGTCAAAGAAAAACAACTTTAGTAACAACAACAAAGGCAAATGGGTGATTTTACCACCTTATACTTCAACTATCAACGCAGTTTCACTGGGAAAAAGGATAACTGGTCGGAGTGCAACAAAAGAGGAAGTTAATGATGATTTAGTTGAGACTAATCCAATCACAGCTCTCAAATGGGTCCTTCGTTGTTGCCCTCAACTCCCTCGTTCACTTGTCCAAAAGCTCTTTCGCCTTCGACAGGTTAGAAGAGAGTGTTCAGAAGTAGTTTTGGGTGTTGGGGCTGAGGCTGAAGAATGTCAGCTCAAAAGGGTGGGATCTAAGCACTTAATGAATGAAGGAGATAGAATATTTCTTCCTATAACTGTAAAAGGCTCATCCATCAAGAAGCAAGAGTATGAGTGCAGTCAAGAAGAAATGAACTTTATTCGTGGTCTCGAGTTGTATAAGGATGAGGCTGTTATTGCCATCAATAAACCGCCGAAATTGCCAGTACAGGTAATTGGCAGGGCGGGCATGGAATCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110315.p1 GENE.S_Transcript_110315~~S_Transcript_110315.p1 ORF type:5prime_partial len:256 (+),score=32.17 S_Transcript_110315:3-770(+)
RVNKCLGSSQSPLAKLTPRKKNLRVYRIHKPDTARTGNSVDKMKGAFLLRQLLKPATTADKVTRTQQSCYGSITATEEESNRSKKNNFSNNNKGKWVILPPYTSTINAVSLGKRITGRSATKEEVNDDLVETNPITALKWVLRCCPQLPRSLVQKLFRLRQVRRECSEVVLGVGAEAEECQLKRVGSKHLMNEGDRIFLPITVKGSSIKKQEYECSQEEMNFIRGLELYKDEAVIAINKPPKLPVQVIGRAGMES*

Click here to download the sequence:
Link to NCBI Protein BLAST