Transcript Information: S_Transcript_110316.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value6E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0943078823355
Replicate 25.3909078556824
Replicate 33.5049543688291
Condition 2: 8 Hour
Replicate 14.8247489405278
Replicate 27.2885660726711
Replicate 35.8835597461713
Condition 3: 24 Hour
Replicate 14.2503619461337
Replicate 25.3326615473759
Replicate 35.3639641947532


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110316.p1 GENE.S_Transcript_110316~~S_Transcript_110316.p1 ORF type:complete len:221 (+),score=41.70,PseudoU_synth_2|PF00849.18|5e-13 S_Transcript_110316:166-828(+)
ATGAAAAAAACTGTCAGTACATTGGACAATAAGGAGATTGACTGGGGGAAGAGAACACTACAGAAGAGATATTTGGCACTTGTTTTTGGAGTTCCTAAAAAGCTGAAGGGATTGATCTCAGCTCCGCTTGCTAAGGTTGTGGTTGATGACGGAAAGTCTGAAAGAATTACAGTTATGGACAATGCTTCGTCTTCGCAGCATGCTGTGACAGAATTCCAAGTCATTGAGACCTCTACTTATGGGTATTCTTGGTTACAGCTCGCGCCGCTTACTGGTAGGAAACACCAGCTTCGTGTACACTGTGCAGAGGTGCTCAGAACACCTATTGTGGGGGACTACAAATATGGGTGGCAAGCTCATCGGAAATGGGAACCTTTGCCACATATGAACTTGAATCCCGATGATAAATTTGAGGAATCAAAATCGAATCACCTTGGCCTCGATTTGAAGTGTGGAAGCATTGCCGAGAAGCAACCCCATTTACATCTACATTGCAAGCAGATGATATTACCCAACATTTCTCAAGCTCTTAAGCATGCATCCCCGAATTCAGATTACGACTTTTCCAAGCTGGAAAGCCTTAACTTGGTTGCTCCCTTGCCGTGGCACATGCAAAGGAGTTGGAACCTTCTCAAGGCTCTTGCCAAGCAAGCTCCACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110316.p1 GENE.S_Transcript_110316~~S_Transcript_110316.p1 ORF type:complete len:221 (+),score=41.70,PseudoU_synth_2|PF00849.18|5e-13 S_Transcript_110316:166-828(+)
MKKTVSTLDNKEIDWGKRTLQKRYLALVFGVPKKLKGLISAPLAKVVVDDGKSERITVMDNASSSQHAVTEFQVIETSTYGYSWLQLAPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQAHRKWEPLPHMNLNPDDKFEESKSNHLGLDLKCGSIAEKQPHLHLHCKQMILPNISQALKHASPNSDYDFSKLESLNLVAPLPWHMQRSWNLLKALAKQAPL*

Click here to download the sequence:
Link to NCBI Protein BLAST