Transcript Information: S_Transcript_110317.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51978518037462
Replicate 20.25854831512713
Replicate 30.72041937826565
Condition 2: 8 Hour
Replicate 11.4161392007471
Replicate 20.34956013499573
Replicate 30.83265029706958
Condition 3: 24 Hour
Replicate 11.0239789136216
Replicate 20
Replicate 30.098523610957485


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110317.p1 GENE.S_Transcript_110317~~S_Transcript_110317.p1 ORF type:5prime_partial len:256 (+),score=29.62 S_Transcript_110317:3-770(+)
CGTGTCAACAAATGTCTTGGGTCGAGCCAGAGTCCCCTTGCCAAATTAACCCCTCGAAAAAAAAACTTGAGGGTTTATCGGATTCATAAACCGGATACGGCGCGAACCGGAAATTCGGTCGACAAAATGAAAGGAGCTTTTCTTCTCCGGCAACTCCTTAAACCTGCGACAACCGCCGACAAAGTCACAAGAACTCAACAATCTTGTTATGCTACTATCACCGCCATAAAGGAAGAGAATAACCAGTCAAAGAAAAACAACTTTAGTAACAACAACAAAGGCAAATGGGTGATTTTACCACCTTATACTTCAACTATCAACGCAGTTTCACTGGGAAAAAGAATAACTGGTCGGAGTACAACAAAAGAGGAAGCTAATAATGAATCAGTTGAGACTAATACAATCACAGCTCTCAAATGGGTCCTTCGTTGTTGCCCTCAACTCCCTCGTTCACTTGTCCAAAAGCTCTTTCGCCTTCGACAGGTTAGGAGAGAGTGTTCAAAAGTAGTTTTGGGTGGTGGGGCTGAGGCTCAAGAATGTCAGCTCAAAAGGGTGGGATCTAAGCACTTAATGAATGAAGGAGATAGAATATTTCTTCCTATAACTGTAAAAGGCTCATCCATCAAGAAGCAAGAGTATGAGTGCAGTCAAGAAGAAATGAACTTTATTCGTGGTCTCGAGTTGTATAAGGATGAGGCTGTTATTGCCATCAATAAACCACCGAAACTGCCAGTACAGGTTATTGGCAGGGCGGGCATGGAATCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110317.p1 GENE.S_Transcript_110317~~S_Transcript_110317.p1 ORF type:5prime_partial len:256 (+),score=29.62 S_Transcript_110317:3-770(+)
RVNKCLGSSQSPLAKLTPRKKNLRVYRIHKPDTARTGNSVDKMKGAFLLRQLLKPATTADKVTRTQQSCYATITAIKEENNQSKKNNFSNNNKGKWVILPPYTSTINAVSLGKRITGRSTTKEEANNESVETNTITALKWVLRCCPQLPRSLVQKLFRLRQVRRECSKVVLGGGAEAQECQLKRVGSKHLMNEGDRIFLPITVKGSSIKKQEYECSQEEMNFIRGLELYKDEAVIAINKPPKLPVQVIGRAGMES*

Click here to download the sequence:
Link to NCBI Protein BLAST