Transcript Information: S_Transcript_110321.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25589424264597
Replicate 20.56571255275679
Replicate 30.82755867041797
Condition 2: 8 Hour
Replicate 10.6151554899173
Replicate 21.2906835753688
Replicate 31.8446406581234
Condition 3: 24 Hour
Replicate 11.0502347832016
Replicate 20.50848295203343
Replicate 30.40419942956917


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110321.p1 GENE.S_Transcript_110321~~S_Transcript_110321.p1 ORF type:complete len:312 (+),score=35.90,PseudoU_synth_2|PF00849.18|1.2e+03,PseudoU_synth_2|PF00849.18|4.2e-10 S_Transcript_110321:129-938(+)
ATGAAAGGAGCTTTTCTTCTCCGGCAACTCCTTAAACCTGCGACAACCGCCGACAAAGTCACAAGAACTCAACAATCTTGTTATGCTACTATCACCGCCATAAAGGAAGAGAATAACCAGTCAAAGAAAAACAACTTTAGTAACAACAACAAAGGCAAATGGGTGATTTTACCACCTTATACTTCAACTATCAACGCAGTTTCACTGGGAAAAAGAATAACTGGTCGGAGTACAACAAAAGAGGAAGCTAATAATGAATCAGTTGAGACTAATACAATCACAGCTCTCAAATGGGTCCTTCGTTGTTGCCCTCAACTCCCTCGTTCACTTGTCCAAAAGCTCTTTCGCCTTCGACAGGTTAGGAGAGAGTGTTCAAAAGTAGTTTTGGGTGGTGGGGCTGAGGCTCAAGAATGTCAGCTCAAAAGGGTGGGATCTAAGCACTTAATGAATGAAGGAGATAGAATATTTCTTCCTATAACTGTAAAAGGCTCATCCATCAAGAAGCAAGAGTATGAGTGCAGTCAAGAAGAAATGAACTTTATTCGTGGTCTCGAGTTGTATAAGGATGAGGCTGTTATTGCCATCAATAAACCGCCGAAATTGCCAGTACAGGGCGGGCATGGAATCCTAAAGAGTTTAGATGAACTGGCTGCTACTTGTCTTAGATACGACTATGAGGATTCTCCTCGTCTGGTCCATAGACTTGACAGGGATAGTAGTGGAATATTGGTGATGGGAAGAACGCAAACAAGCACAGCTGTCCTTCATTCTGTTTTCCATGAAAAAAACTGTCAGTACATTGGACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110321.p1 GENE.S_Transcript_110321~~S_Transcript_110321.p1 ORF type:complete len:312 (+),score=35.90,PseudoU_synth_2|PF00849.18|1.2e+03,PseudoU_synth_2|PF00849.18|4.2e-10 S_Transcript_110321:129-938(+)
MKGAFLLRQLLKPATTADKVTRTQQSCYATITAIKEENNQSKKNNFSNNNKGKWVILPPYTSTINAVSLGKRITGRSTTKEEANNESVETNTITALKWVLRCCPQLPRSLVQKLFRLRQVRRECSKVVLGGGAEAQECQLKRVGSKHLMNEGDRIFLPITVKGSSIKKQEYECSQEEMNFIRGLELYKDEAVIAINKPPKLPVQGGHGILKSLDELAATCLRYDYEDSPRLVHRLDRDSSGILVMGRTQTSTAVLHSVFHEKNCQYIGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST