Transcript Information: S_Transcript_110326.p1


Annotated TAIR IDAT3G52740.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19546446-19546868 | Reverse length=140
E-Value1.6E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9490259897365
Replicate 22.2774492446467
Replicate 32.3797078817549
Condition 2: 8 Hour
Replicate 11.3758316333634
Replicate 20.43300352205922
Replicate 31.5127375719664
Condition 3: 24 Hour
Replicate 14.0871072337241
Replicate 25.4100711504829
Replicate 35.8580232166721


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110326.p1 GENE.S_Transcript_110326~~S_Transcript_110326.p1 ORF type:5prime_partial len:155 (-),score=41.11 S_Transcript_110326:202-666(-)
GGAATTAAAGTACAGAAATTAGAAGATCATCGTCATGAATCAAATGAGAGCAGAGTTGAAAAACAGAGCAAATCAGAAAAAAATGTCCAACAGTGTGAAAATGATGAGAAAAATGAAAACTTGAAGAATACCCATGATGAGGAAATGGATGATATATTAGTAGAAGAAGTGCCAATGACATCATCAAACAACAACCAAAGAGAAGAAAGACAAACAACAACAACAACAACAGAAGGTGAAAATGTAGGGCCAAGAGAAAGACTTAAAAGGCATAGAACAGAGGTAGCAGGGCAAGTTTGGATACCAGATATGTGGGGCCAAGAAGATTTTCTTAAAGATTGGATTGATTGTTCTGCATTTGATGCTTGTTTGGTTCCTCAAGGTATAATGTCTGCCAGAGCTTCTCTTGTTCAAGAAGGAAGAAGAGCTAATTCTGGTAGTCTCAGAGTAGAAAACAGTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110326.p1 GENE.S_Transcript_110326~~S_Transcript_110326.p1 ORF type:5prime_partial len:155 (-),score=41.11 S_Transcript_110326:202-666(-)
GIKVQKLEDHRHESNESRVEKQSKSEKNVQQCENDEKNENLKNTHDEEMDDILVEEVPMTSSNNNQREERQTTTTTTEGENVGPRERLKRHRTEVAGQVWIPDMWGQEDFLKDWIDCSAFDACLVPQGIMSARASLVQEGRRANSGSLRVENSC*

Click here to download the sequence:
Link to NCBI Protein BLAST