Transcript Information: S_Transcript_110327.p1


Annotated TAIR IDAT3G52740.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19546446-19546868 | Reverse length=140
E-Value5.1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7854350511262
Replicate 23.6451565355894
Replicate 32.8866891261288
Condition 2: 8 Hour
Replicate 10.92719088335361
Replicate 20.38907562851699
Replicate 30.74142078626022
Condition 3: 24 Hour
Replicate 12.4694216119802
Replicate 25.3210688048816
Replicate 34.3864425052376


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110327.p1 GENE.S_Transcript_110327~~S_Transcript_110327.p1 ORF type:complete len:115 (+),score=33.42 S_Transcript_110327:24-347(+)
ATGGGTGATATATTAGTAGAAGAAGTGCCAATGACATCATCAAACAACAACCAAAGAGAAGAAAGACAAACAACAACAACAGAAGTTGAAAATGGTGAAAATGTGGGGCCAAGAGAAAGACTTAAAAGGCATAGAACAGAGGTAGCAGGGCAAGTTTGGATACCAGATATGTGGGGCCAAGAAGATTTTCTTAAAGATTGGATTGATTGTTCTGCATTTGATGCTGGTTTGGTTCCTCAAGGTATAATGTCTGCTAGAGCTTCTCTTGTTCAAGAAGGAAGAAGAGCTAGTTCTGGTACTCTCAGAGTAGAAAACAGTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110327.p1 GENE.S_Transcript_110327~~S_Transcript_110327.p1 ORF type:complete len:115 (+),score=33.42 S_Transcript_110327:24-347(+)
MGDILVEEVPMTSSNNNQREERQTTTTEVENGENVGPRERLKRHRTEVAGQVWIPDMWGQEDFLKDWIDCSAFDAGLVPQGIMSARASLVQEGRRASSGTLRVENSC*

Click here to download the sequence:
Link to NCBI Protein BLAST