Transcript Information: S_Transcript_110423.p1


Annotated TAIR IDAT1G21700.1
Annotated Gene NameSWITCH/sucrose nonfermenting 3C
Annotated Gene Symbol(s)ATSWI3C, CHB4, SWI3C
Annotation TypeHomolog
Chromosome Positionchr1:7620156-7623978 | Reverse length=807
E-Value2E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3323312009746
Replicate 25.3359405276322
Replicate 34.0808112431981
Condition 2: 8 Hour
Replicate 15.1210199732395
Replicate 24.988576883644
Replicate 34.7531049547986
Condition 3: 24 Hour
Replicate 14.8710717903555
Replicate 24.0818185514862
Replicate 33.8936260659699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110423.p1 GENE.S_Transcript_110423~~S_Transcript_110423.p1 ORF type:5prime_partial len:583 (-),score=85.94,SWIRM|PF04433.13|2.5e-22,Myb_DNA-binding|PF00249.27|4.4e-12,Myb_DNA-bind_6|PF13921.2|1.9e-06 S_Transcript_110423:1-1749(-)
CATTTTCTCTCTCCTCTTTCCCTCCTAATTTCTCGTTCCAATGCCTTCTTCTCCCTCAGGTACGTTAACCCTCCGTTTCTCTACTCTAAATCCAAATTCCTTCTTTTTTTTAACCCTAATTTCTCTCTTTTTTCTTCTACAGATGCTCGCCCTAAATGGCGGAGAACCCGCGGTCCGAAGACCACCTCGAAACGGCACCGTCCCGAGGACGACGACGACAACAACAACAACGACGACGATGACGAAAACGACGTCGCTCCAGCTGTCGAACCTGACGAAGATGAAGACCTCCACCCTACTACCACTCCTCCAAACCCTAAAACCCCTTTAAACAACAATCGGAGCGAAACCGAGGTCCTTTCCGGTGGGGCGGTTAGGGTTTCGGATTTCCCGGTGGCATTCAAGCGCGCCGTCAACCGGCCCCACTCCTCCGTCCTCGCAATTGTCGCTGCCGAGAAGGGTCAGGGACAGAGTGGTAATTGTAGTGGTAGTGGTGGTGGTGGTGTGGTTTTGGAGAATTTATCGTACGGACAGCTACAGGCATTGTCGGCTGTGCCCTCGGATAACCCGGCATTAGGGTCGGGGTCCGGGGATCAGGAGGGGCCGGTTGTGATTACTCCCCCTCCGATTATGGAAGGGAAGGGTGTTGTTAAGAGGTTTTGGGATCGGGTCCATGTTTTTCCTCTTCATTCAGATTGGTTTCAACCGACCACAGTGCACAGACTGGAGAGACAAGTGGTGCCACATTTCTTTTCTGGGAAGTCAGCTGAACACACACCGGAAAAATACATGGATTGTAGGAATATAATTGTTGCCAAATACATGGAAAGCCCAGAGAAAAGGTTGTCGCTTGGGGATTGCCAAGAATTGGCTTTTGGGGTTGACAAAGAAGATCTCAGTCGAATTTTCCGCTTTCTTGATAATTGGGGTATCATTAACTACTGTGCCCCTCGGCCTCATCATGATTCTTGGAGTATTGAGTCATACTTGAGAGAGGAGCCAAATGGTGAAGTTCATGTGCCATCAGCAACTTTGAAGTCTATTGATAGTCTGATCAAGTTTGATAAGCCAAAATGCAGGCTCAAGCCTGGTGATGTGTGCTTGTCATCATCAACATCAAATGGCAATGATCTTTTGGACTTGGACAGTAAAATACGAGAGAAATTATCCGAGAATCATTGCAATTATTGTTCTCAGCCCCTGTTAGTCGCATACTACCAGTCTGTTAAAGAGGTTGATACAATGCTGTGTTCAGATTGCTATTATGAGGGGAAATTCGTTATTGGCCATTCAAGCATAGACTTCACTAAAGTAGATCCTACAAAAGAGTATCCTGATCAAGATGGAGAAAGTTGGACTGATCAGGAAACGCTTCTGCTCCTCGAGGCAGTTGAAATTTATAATGATAGTTGGAACGAAATAGCAGATCATGTTGGAACTAAGTCAAAGGCACAATGCATTCTTCACTTTCTTCGTTTGCCCATGGAAGATGGCTTATTGGAAAATGTAGAAGTTCCCACCACCTCCTTTGCATCTAATGGGTCACTCAAGGATGATCATTGCAGATCATATTCAAATACAAATGGTGTCCCTTCAGGACCCCATGTTCAGGATTCTGATTCTAATTCAGATAGTAGGTTTCCATTTGCGAATTCTGGGAATCCTGTCATGCATCTGGTAGGTGGTTGTTTTTTTAACTTGCTTCATAATTGGTTGCTTTATGATCTAATCACAAGTGTTTTGTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110423.p1 GENE.S_Transcript_110423~~S_Transcript_110423.p1 ORF type:5prime_partial len:583 (-),score=85.94,SWIRM|PF04433.13|2.5e-22,Myb_DNA-binding|PF00249.27|4.4e-12,Myb_DNA-bind_6|PF13921.2|1.9e-06 S_Transcript_110423:1-1749(-)
HFLSPLSLLISRSNAFFSLRYVNPPFLYSKSKFLLFFNPNFSLFSSTDARPKWRRTRGPKTTSKRHRPEDDDDNNNNDDDDENDVAPAVEPDEDEDLHPTTTPPNPKTPLNNNRSETEVLSGGAVRVSDFPVAFKRAVNRPHSSVLAIVAAEKGQGQSGNCSGSGGGGVVLENLSYGQLQALSAVPSDNPALGSGSGDQEGPVVITPPPIMEGKGVVKRFWDRVHVFPLHSDWFQPTTVHRLERQVVPHFFSGKSAEHTPEKYMDCRNIIVAKYMESPEKRLSLGDCQELAFGVDKEDLSRIFRFLDNWGIINYCAPRPHHDSWSIESYLREEPNGEVHVPSATLKSIDSLIKFDKPKCRLKPGDVCLSSSTSNGNDLLDLDSKIREKLSENHCNYCSQPLLVAYYQSVKEVDTMLCSDCYYEGKFVIGHSSIDFTKVDPTKEYPDQDGESWTDQETLLLLEAVEIYNDSWNEIADHVGTKSKAQCILHFLRLPMEDGLLENVEVPTTSFASNGSLKDDHCRSYSNTNGVPSGPHVQDSDSNSDSRFPFANSGNPVMHLVGGCFFNLLHNWLLYDLITSVLL*

Click here to download the sequence:
Link to NCBI Protein BLAST