Transcript Information: S_Transcript_110520.p1


Annotated TAIR IDAT5G05220.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1550273-1550821 | Forward length=182
E-Value6.2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6804461675721
Replicate 24.7617531419097
Replicate 31.3268155455828
Condition 2: 8 Hour
Replicate 11.3807806680158
Replicate 21.9313826163793
Replicate 31.9935684810414
Condition 3: 24 Hour
Replicate 17.7007143240224
Replicate 28.1524502073192
Replicate 37.6210493885962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110520.p1 GENE.S_Transcript_110520~~S_Transcript_110520.p1 ORF type:5prime_partial len:139 (+),score=36.52 S_Transcript_110520:2-418(+)
GAACAGAGAAAAAAAAAAATGGAACTCACATTATCTCAAGTGAAGACTAACAACAACAAAATTTTCTCCCTACTTCCAACTCCAACAGCCAAACAGGCCCTTATTGTTGGAACCCAAAAAATGGGGCCCAATAGAGGGAATATGAAAATGAGGTGTTCAAAGGAAAAGACTAGTTTGGTGGTGGATTTAGAGAGAGAATTGGAAGAGATAGAGAGAGAAGGGAAATGGTGGAGAGGAAGAAAGTCATCAGGAGGAATGGTGGAATTACTGGAGTGTTTGGAAAGAGAAGCAATCATGGGAGAAGATGAAGGAAAAGAACCAACTGATTATAATAGAGGGGCTCAGATTTTTGACAAGAGCTCCCAAGGTTTTTCAAGCCCTCAAGGAAGCCAAACAAACACAGCCTTGACTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110520.p1 GENE.S_Transcript_110520~~S_Transcript_110520.p1 ORF type:5prime_partial len:139 (+),score=36.52 S_Transcript_110520:2-418(+)
EQRKKKMELTLSQVKTNNNKIFSLLPTPTAKQALIVGTQKMGPNRGNMKMRCSKEKTSLVVDLERELEEIEREGKWWRGRKSSGGMVELLECLEREAIMGEDEGKEPTDYNRGAQIFDKSSQGFSSPQGSQTNTALTC*

Click here to download the sequence:
Link to NCBI Protein BLAST