Transcript Information: S_Transcript_110521.p1


Annotated TAIR IDAT5G05220.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1550273-1550821 | Forward length=182
E-Value8.6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.044225977054
Replicate 223.263485587856
Replicate 322.833863722553
Condition 2: 8 Hour
Replicate 12.0309895540127
Replicate 21.6740839118163
Replicate 31.4500576602028
Condition 3: 24 Hour
Replicate 115.306278908375
Replicate 218.038543907705
Replicate 329.51150773932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110521.p1 GENE.S_Transcript_110521~~S_Transcript_110521.p1 ORF type:5prime_partial len:147 (+),score=41.25 S_Transcript_110521:2-442(+)
GAACAGAGAAAAAAAAAAATGGAACTCACATTATCTCAAGTGAAGACTAACAACAAAATTTTCTCCCTACTTCCAACTCCAACAGCCAAACAGGCCCTTATTGTTGGAACCCAAAAAATGGGGCCCAATAGAGGGAATATGAAAATGAGGTGTTCAAAGGAAAAGACTAGTTTGGTGGTGGATTTAGAGAGAGAATTGGAAGAGATAGAGAGAGAAGGGAAATGGTGGAGAGGAAAGGAGAATTGTAAAGGAAGAAAGCCATCAATGGAAGAAGAAGAAATGGTGGAATTACTGGAGTGTTTGGAAAGAGAAGCAATCATGGGAGAAGATGAAGGAAAAGAACCAACTGATTATAATAGAGGGGCTCAGATTTTTGACAAGAGCTCCCAAGGTTTTTCAAGCCCTCAAGGAAGCCAAACAAACACAGCCTTGACTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110521.p1 GENE.S_Transcript_110521~~S_Transcript_110521.p1 ORF type:5prime_partial len:147 (+),score=41.25 S_Transcript_110521:2-442(+)
EQRKKKMELTLSQVKTNNKIFSLLPTPTAKQALIVGTQKMGPNRGNMKMRCSKEKTSLVVDLERELEEIEREGKWWRGKENCKGRKPSMEEEEMVELLECLEREAIMGEDEGKEPTDYNRGAQIFDKSSQGFSSPQGSQTNTALTC*

Click here to download the sequence:
Link to NCBI Protein BLAST