Transcript Information: S_Transcript_110584.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20845692873509
Replicate 20
Replicate 30.28892014752377
Condition 2: 8 Hour
Replicate 10.22271948111888
Replicate 20.17523641232162
Replicate 30.055654954582197
Condition 3: 24 Hour
Replicate 10.2851812466135
Replicate 20
Replicate 30.32926950920517


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110584.p1 GENE.S_Transcript_110584~~S_Transcript_110584.p1 ORF type:3prime_partial len:383 (+),score=13.69,RVT_1|PF00078.23|3.6e-38 S_Transcript_110584:1979-3124(+)
ATGTCTATGGGGAGAAATAAATCTCCTGGGCCAGATGGGTTTCCAGTGGAATTTTTCATTAGGCATTGGGATATAGTGGGAGGAGAATTGGCGGGTGCGGTTCAGCATTTTTTTGAGAATGGGTTTTTACTTAAGGAATGGAATAAAACATTCATCACTCTCCTACCTAAAGTTGACAGTCCGTTAGAGGTAAGCCACTTCAGGCCTATTGGGCTTTGCAATGTGGTATATAAAGGTATAGCCAGATGCTTGGTTAACAGATTGAAACTGGTCTTAAACGAAATTATATCCCCAAACCAGAATGCCTTCATTCCAGGGTGGTCCTTACAAGATAACAGTCTCTTAGCACATGAATTATTATCTTTTCTGCAAAGTAGAAGTTCTAAATATAAGACTTTCTATATGGCAATCAAACTAGATATGAACAAAGCTTATGATAGAATTAGTTGGAAATTCATCAGGGTTGTCATGATAAAAATGGGTTTCCCGGAGAGGTGGATCCACTGGATTATGCAAAGCATTACTACAGTCTCCTTTTCAATATTGTTAAATGGGGAACCAACTCCTTTCTTTAAACCAAAATGTGGCTTAAGGCAAGGGGATCCTCTATCCCCTTACCTATTCTTGTTATGCATGGAGGCTCTTTCAAAGTCTTTGCTAAAAGCACAAGAAAGGGGTCAAATTTCTGGAATTAAAGTGGCCCGAGGAGCACCGCCTATTAATCATCTCTTATTTGCCAATGATATTATTCTGTTTTCCAAAGTCACGCCAAAGAATTGTTCTGAGATCAAGAAAGTTCTGGATAAATTTTGCTTCGGTACTAGACAAAGGATCAACAATAGTAAGTCTGCAGTTTGTTTTAGTCCAAATACCCCAACCAGGTTTATCAGATACATGAGAAGCATACTTCATATTCAGAGTACTAAGGACTTGAGTATTTATTTGGGGGCTATAACTATGGTTCGTAGGGCTACAGTATCGGCTTTCTCATCCTTAACAGACAAAATTCACCATGGATTGTCTAAGTGGGAAATTTCCTTATTCTCTCAGGCAGGTAAGTTGGTCCTAATTAATGCAGTCCTAGTAGCAGCGGTAATGCATGTTATGAGTATCTTCTTAATCCCGAAGACCGTCACTGGTAAACTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110584.p1 GENE.S_Transcript_110584~~S_Transcript_110584.p1 ORF type:3prime_partial len:383 (+),score=13.69,RVT_1|PF00078.23|3.6e-38 S_Transcript_110584:1979-3124(+)
MSMGRNKSPGPDGFPVEFFIRHWDIVGGELAGAVQHFFENGFLLKEWNKTFITLLPKVDSPLEVSHFRPIGLCNVVYKGIARCLVNRLKLVLNEIISPNQNAFIPGWSLQDNSLLAHELLSFLQSRSSKYKTFYMAIKLDMNKAYDRISWKFIRVVMIKMGFPERWIHWIMQSITTVSFSILLNGEPTPFFKPKCGLRQGDPLSPYLFLLCMEALSKSLLKAQERGQISGIKVARGAPPINHLLFANDIILFSKVTPKNCSEIKKVLDKFCFGTRQRINNSKSAVCFSPNTPTRFIRYMRSILHIQSTKDLSIYLGAITMVRRATVSAFSSLTDKIHHGLSKWEISLFSQAGKLVLINAVLVAAVMHVMSIFLIPKTVTGKL

Click here to download the sequence:
Link to NCBI Protein BLAST