Transcript Information: S_Transcript_110605.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61890700546931
Replicate 20
Replicate 30.21445041957675
Condition 2: 8 Hour
Replicate 10
Replicate 20.26013777488054
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.293279586106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110605.p1 GENE.S_Transcript_110605~~S_Transcript_110605.p1 ORF type:3prime_partial len:86 (+),score=14.96,PPR_2|PF13041.2|5.9e-10,PPR_2|PF13041.2|2.3e-05,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|8.7e-09,PPR|PF01535.16|0.0025,PPR|PF01535.16|0.0015,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.22 S_Transcript_110605:8-262(+)
ATGGATATTGCAAGGCTCAAAACATTGATGCAGCTCTCAGCCTGTTTCAAGAAATTTCTCTTGAGGGCCTCTGACCTGATGTTTGTACCTACAATACTCTCATTGATGGCTTGTGCAAGAACAAATAGACTTGAATTTGCTATTCAACTTTTTGAGAAAATGAAAGCTTATGGACTACATACAAATGTTGTCACATATGCTTCATTACTTGATGGTTTATGTAAAAATGCCCAAGTTGACGAGGCCATATCAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110605.p1 GENE.S_Transcript_110605~~S_Transcript_110605.p1 ORF type:3prime_partial len:86 (+),score=14.96,PPR_2|PF13041.2|5.9e-10,PPR_2|PF13041.2|2.3e-05,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|8.7e-09,PPR|PF01535.16|0.0025,PPR|PF01535.16|0.0015,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.22 S_Transcript_110605:8-262(+)
MDIARLKTLMQLSACFKKFLLRASDLMFVPTILSLMACARTNRLEFAIQLFEKMKAYGLHTNVVTYASLLDGLCKNAQVDEAISM

Click here to download the sequence:
Link to NCBI Protein BLAST