Transcript Information: S_Transcript_110610.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80297848554424
Replicate 21.1411787702163
Replicate 30.95393462501382
Condition 2: 8 Hour
Replicate 11.286877001896
Replicate 21.4464557310168
Replicate 31.2863011485765
Condition 3: 24 Hour
Replicate 11.035748786192
Replicate 20.78151074401198
Replicate 30.97844137778468


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110610.p1 GENE.S_Transcript_110610~~S_Transcript_110610.p1 ORF type:complete len:232 (+),score=44.57,PPR_2|PF13041.2|5.2e-17,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|5.8e-11,PPR_2|PF13041.2|2.3e-17,PPR_2|PF13041.2|1.5e-07,PPR_1|PF12854.3|7.5e-09,PPR_1|PF12854.3|6.6e-13,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|3.2e-10,PPR_1|PF12854.3|3.7e-07,PPR_1|PF12854.3|3.9e+03,PPR|PF01535.16|4.6e-07,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|0.077,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|0.00036,PPR_3|PF13812.2|4.1e-07,PPR_3|PF13812.2|1.8e-07,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.00024,PPR_3|PF13812.2|0.068,MRP-S27|PF10037.5|0.38,MRP-S27|PF10037.5|0.014 S_Transcript_110610:314-1009(+)
ATGGATATTGCAAGGCTAAAAACATTGGTGCAGCCTTCGACTTGTTCCACCAAATGGCTCTTGAGGGCGTCTCACCTAATATTTATACCTACAACACTCATTGATGGCTTGTGCAAGAGCCATAGACTTGAATCAGCTTTCCAACTTTTCGAGGAAATGAAAGCTCATGGACTGCATCCAAATGCTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATGCACGAATTGAAGAGGCTAGAGAATTGTTCGAGGACATGATGAAGAATGGAGTGGTTCCTAATCAATCGATTTATGTTATTTTTCTTAATGCTTTGTGCGAAGCTCGTAGATTTACAGAGGCAGAGGACATCTTCTCTTTTCTTTTAACCAAGGGGTTAAAACCAAATGTGCACATTTATACCATAATGATCAAAGGACTTTGCAAACAAAGGAAGATGGATGCTGCCATTGAACTAACATCGAAAATGGAGGAAAATGGATGTGCACCTGATGATTGCACTTACAACACAATTATTAGAGGACTTATTCAGGGGAATGATCTCAAAAAAGCTTTGGAGCTTGTCACCATTATGACTGCCAAAGGTTTTGCAGCTGATGCTAGCACTTATGTTTTATTTATCAACTTGCTGTCTGCTGATAATGTTAACCCTGCAGACAAGACTTTGCTTCAAAAGTTTTTTGAGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110610.p1 GENE.S_Transcript_110610~~S_Transcript_110610.p1 ORF type:complete len:232 (+),score=44.57,PPR_2|PF13041.2|5.2e-17,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|5.8e-11,PPR_2|PF13041.2|2.3e-17,PPR_2|PF13041.2|1.5e-07,PPR_1|PF12854.3|7.5e-09,PPR_1|PF12854.3|6.6e-13,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|3.2e-10,PPR_1|PF12854.3|3.7e-07,PPR_1|PF12854.3|3.9e+03,PPR|PF01535.16|4.6e-07,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|0.077,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|0.00036,PPR_3|PF13812.2|4.1e-07,PPR_3|PF13812.2|1.8e-07,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.00024,PPR_3|PF13812.2|0.068,MRP-S27|PF10037.5|0.38,MRP-S27|PF10037.5|0.014 S_Transcript_110610:314-1009(+)
MDIARLKTLVQPSTCSTKWLLRASHLIFIPTTLIDGLCKSHRLESAFQLFEEMKAHGLHPNAVTYASLLDGLCKNARIEEARELFEDMMKNGVVPNQSIYVIFLNALCEARRFTEAEDIFSFLLTKGLKPNVHIYTIMIKGLCKQRKMDAAIELTSKMEENGCAPDDCTYNTIIRGLIQGNDLKKALELVTIMTAKGFAADASTYVLFINLLSADNVNPADKTLLQKFFES*

Click here to download the sequence:
Link to NCBI Protein BLAST