Transcript Information: S_Transcript_110614.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value2E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70653985580125
Replicate 20.8297951824729
Replicate 31.7545080787496
Condition 2: 8 Hour
Replicate 11.3682219451258
Replicate 21.2868762491878
Replicate 31.2732917817135
Condition 3: 24 Hour
Replicate 11.4015522593523
Replicate 21.0529646971312
Replicate 31.3392235967318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110614.p1 GENE.S_Transcript_110614~~S_Transcript_110614.p1 ORF type:complete len:452 (+),score=75.21,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|60,PPR_2|PF13041.2|4e-12,PPR_2|PF13041.2|2.4e-16,PPR_2|PF13041.2|3.5e-20,PPR_2|PF13041.2|4.4e-08,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|8.8e-20,PPR_2|PF13041.2|2.1e-14,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|4.8e-12,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|8.6e-11,PPR_1|PF12854.3|6.6e-14,PPR_1|PF12854.3|0.93,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|25,PPR|PF01535.16|0.2,PPR|PF01535.16|0.00011,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|6e-09,PPR|PF01535.16|3.7e-07,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|3.3e-05,PPR_3|PF13812.2|9.5e-05,PPR_3|PF13812.2|6e-05,PPR_3|PF13812.2|7.5e-05 S_Transcript_110614:59-1357(+)
ATGGCGTTACTTGGAAAAGAAAAAACTTGTTCACTTGTAGTATTTGGCGCTGGAAATTTTGTTCCTGGTGTGTTCTCCTCCTTTTCCAGGTTTCCTTTCCTTCCTTGTTCATCTTCTCCCTTTCATTTTCATCTTGGTTGCTTTTATTACTCCAATTATGCCAATGTCTATGCGATTTCAAAGAGAGATAACTGTTTTGTTCACGATCCTGAATCATTCCTCAAATTGGCAAGACAACAATTCAAATTAGGGTTTACTAGTATCAACCGCCCCCTTTCTCTCTTCCGTCGAATGGTCTCTTTAAGACCTCTCCCTACCGTCATTGATTTCAATCAGCTCTTTACTGCTATGCTCAACATCAAACCTTTCCCACCTTTCTCCACTGTCATCTCTCTCTCCAGGCATCTTGAATTCTCAACTGGGCTTCGACCTGACAAGCATTCTGTGGGTATTCTTGCTACTTGTTGCTGTCACTTAGGCCGTGTTGATTTTGGGTTCTCCCTTCTTGGTAAACGCCTTAAGCTTGGTTATCCTCTCAATGCTGTCATCTTCAGCACTCTCCTTAATGGCCTTATCCAAACCGAACAGTTGCCTCAGGCTGTTCGATTGCTGGATAAAATTGTCAAGCTTGGCCTCCAACCTGACATTGTTACCTTTAACACCATGGTCAAAGGTCTTTGCAGAACTGGGGACAATCCTGGTGCTCTCCACTTGCTTAGGAACATGCAACGTGGCCACTGTCAGCCTAATGTAGTTACCTATAACACTGTCATTGATAGCCTCTGTAAAGACAGGTTCTTGCCTCAAGCCCTCAAGCTTTTCTCCGAGATGAAAAGTCAGGGGATTTCACCTAGTGTCATCACTTATAGTACATTAGTTAGAGGCTTGTGCACTCTGGGACAATGGAAAGATGCTGAGGCATTGCTAAGTGAAATGTTGGACAACAACATAGCTCCCGATGTTGAGACTTTCAACACCATGATTGACATGCACTGTAAAGAAGGGAGGGTGGATGAAGCACATGCCATCCTAGAATACATGCTAGACAGAGCTGAGACTCCAGACATAATTACTTACAACTCTCTGCTGGATGGATATTGCTTGTGCGGAATGATGGATGAGGCGACACAGCTAATGGATTTCATGGTGGAAAAGGGTTGCCAGCCTGATGTTGTGACTTTCAGCTCCTTGATCAATGGATATTGCAAGGCTAAAAACATTGGTGCAGCCTTCGACTTGTTCCACCAAATGGCTCTTGAGGGCGTCTCACCTAATATTTATACCTACAACACTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110614.p1 GENE.S_Transcript_110614~~S_Transcript_110614.p1 ORF type:complete len:452 (+),score=75.21,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|60,PPR_2|PF13041.2|4e-12,PPR_2|PF13041.2|2.4e-16,PPR_2|PF13041.2|3.5e-20,PPR_2|PF13041.2|4.4e-08,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|8.8e-20,PPR_2|PF13041.2|2.1e-14,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|4.8e-12,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|8.6e-11,PPR_1|PF12854.3|6.6e-14,PPR_1|PF12854.3|0.93,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|25,PPR|PF01535.16|0.2,PPR|PF01535.16|0.00011,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|6e-09,PPR|PF01535.16|3.7e-07,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|3.3e-05,PPR_3|PF13812.2|9.5e-05,PPR_3|PF13812.2|6e-05,PPR_3|PF13812.2|7.5e-05 S_Transcript_110614:59-1357(+)
MALLGKEKTCSLVVFGAGNFVPGVFSSFSRFPFLPCSSSPFHFHLGCFYYSNYANVYAISKRDNCFVHDPESFLKLARQQFKLGFTSINRPLSLFRRMVSLRPLPTVIDFNQLFTAMLNIKPFPPFSTVISLSRHLEFSTGLRPDKHSVGILATCCCHLGRVDFGFSLLGKRLKLGYPLNAVIFSTLLNGLIQTEQLPQAVRLLDKIVKLGLQPDIVTFNTMVKGLCRTGDNPGALHLLRNMQRGHCQPNVVTYNTVIDSLCKDRFLPQALKLFSEMKSQGISPSVITYSTLVRGLCTLGQWKDAEALLSEMLDNNIAPDVETFNTMIDMHCKEGRVDEAHAILEYMLDRAETPDIITYNSLLDGYCLCGMMDEATQLMDFMVEKGCQPDVVTFSSLINGYCKAKNIGAAFDLFHQMALEGVSPNIYTYNTH*

Click here to download the sequence:
Link to NCBI Protein BLAST