Transcript Information: S_Transcript_110617.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57854350511262
Replicate 20
Replicate 30.30069678397175
Condition 2: 8 Hour
Replicate 10.57949430209601
Replicate 20.72951680346935
Replicate 30.69508198711896
Condition 3: 24 Hour
Replicate 10.59361096441832
Replicate 20.73903733401133
Replicate 30.27415265657735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110617.p1 GENE.S_Transcript_110617~~S_Transcript_110617.p1 ORF type:3prime_partial len:184 (+),score=30.73 S_Transcript_110617:113-661(+)
ATGAAGCTTGGAAATGCTTTCTTAGAAGTTGGTCCCCGTACACTATGGCTAAATACAGCTAACAGTATTTCCTCTTCCTTTCAATTTTGTTGTCGCAATTACTCCAACAATTACAATATGCCCAGCTCAAGAACATTAGATTTTGATGAACATTCTGAAGTTTTCCTCGATTCTGTACGGCAACAATGCAGGTTAGGGTTTTCTGACATTGATCGCCCCCTTTTCCTGTTTCGTCGAATGTTGAGTTTGAGACCTCTTCCTACTGTCATTGATTTCAATCAGCTATTTACTGCAATGCTCAAGATCAAACCTTTCCCACCTTTCTCCACTGTCATCTCTCTCTCCAGGCATTTGGAATTGTCAACCAAGATTCGACCTGACAAGCATTCTGTGGGTATTCTTGCTACTTGTTGCTGTCACTTAGGCCGTGTTGATTTTGGGTTCTCCCTTCTTGGTAAACGCCTTAAGCTTGGGTATCCTCTCGATGCTGTCATCTTCAACACTCTTCTTAATGGCCTTGTCCGTTCTGAGCAATTGCCTCAAGCTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110617.p1 GENE.S_Transcript_110617~~S_Transcript_110617.p1 ORF type:3prime_partial len:184 (+),score=30.73 S_Transcript_110617:113-661(+)
MKLGNAFLEVGPRTLWLNTANSISSSFQFCCRNYSNNYNMPSSRTLDFDEHSEVFLDSVRQQCRLGFSDIDRPLFLFRRMLSLRPLPTVIDFNQLFTAMLKIKPFPPFSTVISLSRHLELSTKIRPDKHSVGILATCCCHLGRVDFGFSLLGKRLKLGYPLDAVIFNTLLNGLVRSEQLPQAV

Click here to download the sequence:
Link to NCBI Protein BLAST