Transcript Information: S_Transcript_110618.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value7E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50213209877699
Replicate 20
Replicate 30.34797615252077
Condition 2: 8 Hour
Replicate 10.80473171008049
Replicate 20.14070345056432
Replicate 30.13406193462252
Condition 3: 24 Hour
Replicate 10.13738920434336
Replicate 20
Replicate 30.31725842019014


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110618.p1 GENE.S_Transcript_110618~~S_Transcript_110618.p1 ORF type:3prime_partial len:159 (+),score=26.59,PPR_2|PF13041.2|2.6e-17,PPR_2|PF13041.2|1.5e-09,PPR_2|PF13041.2|4.7e-16,PPR_2|PF13041.2|1.2e-09,PPR_1|PF12854.3|4.4e-09,PPR_1|PF12854.3|1.5e-12,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|1.7e-10,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|2e-07,PPR_3|PF13812.2|2.3e-07,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|4.7e-05 S_Transcript_110618:96-569(+)
ATGCAGCCTTCGACTTGTTCCACCAAATGGCTCTTGAGGGCGTCTCACCTAATATTTATACCTACAACACTCATTGATGGCTTGTGCAAGAGCCATAGACTTGAATCAGCTTTCCAACTTTTCGAGGAAATGAAAGCTCATGGACTGCATCCAAATGCTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATATCAATGCTAAAGCAAATGGACAAGAATGGGGTGGTCCCTATCATTACCATCTTCAATATCTTAATTGCCGGTTTATGTCAAGCAGGAAGACTTGGAGAAGCACTCACATTCTTCTCTTCTCTCGAGTCCAAGGGGTTACAACCTAATCAGCGTACATACAATGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATCAAGTGATGCACGTAAACTATTGACAGTGATGGAGGTAAATGGATGTCCTCCAGATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110618.p1 GENE.S_Transcript_110618~~S_Transcript_110618.p1 ORF type:3prime_partial len:159 (+),score=26.59,PPR_2|PF13041.2|2.6e-17,PPR_2|PF13041.2|1.5e-09,PPR_2|PF13041.2|4.7e-16,PPR_2|PF13041.2|1.2e-09,PPR_1|PF12854.3|4.4e-09,PPR_1|PF12854.3|1.5e-12,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|1.7e-10,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|2e-07,PPR_3|PF13812.2|2.3e-07,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|4.7e-05 S_Transcript_110618:96-569(+)
MQPSTCSTKWLLRASHLIFIPTTLIDGLCKSHRLESAFQLFEEMKAHGLHPNAVTYASLLDGLCKNTQVDEAISMLKQMDKNGVVPIITIFNILIAGLCQAGRLGEALTFFSSLESKGLQPNQRTYNVMIKGLCKQGKSSDARKLLTVMEVNGCPPDA

Click here to download the sequence:
Link to NCBI Protein BLAST