Transcript Information: S_Transcript_110620.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.45026101137785
Replicate 30.094095592263268
Condition 2: 8 Hour
Replicate 10
Replicate 20.45656833958626
Replicate 30.43501729806084
Condition 3: 24 Hour
Replicate 10.11145348719691
Replicate 20.46252676686423
Replicate 30.1286839000261


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_110620.p1 GENE.S_Transcript_110620~~S_Transcript_110620.p1 ORF type:3prime_partial len:196 (+),score=30.14,PPR_2|PF13041.2|3.8e-17,PPR_2|PF13041.2|1.4e-14,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|6.3e-15,PPR_1|PF12854.3|5.9e-09,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|1.7e-10,PPR_1|PF12854.3|6e-05,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|0.11,PPR_3|PF13812.2|3.2e-07,PPR_3|PF13812.2|4.5e-05,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|77 S_Transcript_110620:328-912(+)
ATGGATATTGCAAGGCTAAAAACATTGGTGCAGCCTTCGACTTGTTCCACCAAATGGCTCTTGAGGGCGTCTCACCTAATATTTATACCTACAACACTCATTGATGGCTTGTGCAAGAGCCATAGACTTGAATCAGCTTTCCAACTTTTCGAGGAAATGAAAGCTCATGGACTGCATCCAAATGCTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATATCAATGCTGAGTCAAATGGAGAATAATGGAGTTGCCCCCACTGTTGTCATCTTTAATATCCTAATTGACGGTCTATGTGAAGTTGGGAGACTTGGAGAAGCAGTCACATTCTTCTCTTCTCTCCAGTCTAGGGGGTTACAACCAAATCAGCGTACATATAACGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATTAGGTGAAGCCCGTAAACTATTAGCAGTGATTGAGGAAAATGGATGTCCTCCAAATGATTGCACCTACAACACAATCATTCAAGGATTCCTTCATGGTAAGGATATCATAACAGCTTTGGAACTCGTAGACATTTTGAAAGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_110620.p1 GENE.S_Transcript_110620~~S_Transcript_110620.p1 ORF type:3prime_partial len:196 (+),score=30.14,PPR_2|PF13041.2|3.8e-17,PPR_2|PF13041.2|1.4e-14,PPR_2|PF13041.2|1.3e-18,PPR_2|PF13041.2|6.3e-15,PPR_1|PF12854.3|5.9e-09,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|1.7e-10,PPR_1|PF12854.3|6e-05,PPR|PF01535.16|3.5e-07,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|0.11,PPR_3|PF13812.2|3.2e-07,PPR_3|PF13812.2|4.5e-05,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|77 S_Transcript_110620:328-912(+)
MDIARLKTLVQPSTCSTKWLLRASHLIFIPTTLIDGLCKSHRLESAFQLFEEMKAHGLHPNAVTYASLLDGLCKNTQVDEAISMLSQMENNGVAPTVVIFNILIDGLCEVGRLGEAVTFFSSLQSRGLQPNQRTYNVMIKGLCKQGKLGEARKLLAVIEENGCPPNDCTYNTIIQGFLHGKDIITALELVDILKA

Click here to download the sequence:
Link to NCBI Protein BLAST